Information for 5-WCYYWTGACAAAT (Motif 6)

C G T A A G T C A G C T A G T C C G T A A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C G T
Reverse Opposite:
G T C A A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G A T T C A G C T G A A C T G C G A T
p-value:1e-13
log p-value:-3.089e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.3 +/- 29.4bp
Average Position of motif in Background57.4 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:WCYYWTGACAAAT---
-ACCGTGACTAATTNN
 C G T A A G T C A G C T A G T C C G T A A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:WCYYWTGACAAAT---
ATTTACGACAAATAGC
 C G T A A G T C A G C T A G T C C G T A A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.69
Offset:4
Orientation:forward strand
Alignment:WCYYWTGACAAAT
----TTGACAG--
 C G T A A G T C A G C T A G T C C G T A A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:WCYYWTGACAAAT
---RHTGWCAR--
 C G T A A G T C A G C T A G T C C G T A A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.65
Offset:5
Orientation:forward strand
Alignment:WCYYWTGACAAAT
-----TGTCANYT
 C G T A A G T C A G C T A G T C C G T A A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:WCYYWTGACAAAT
----TTGACAGG-
 C G T A A G T C A G C T A G T C C G T A A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:WCYYWTGACAAAT
---CATGAC----
 C G T A A G T C A G C T A G T C C G T A A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:WCYYWTGACAAAT
---GGTGCCAAGT
 C G T A A G T C A G C T A G T C C G T A A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:WCYYWTGACAAAT----
-NTATTGACAGCTNNTT
 C G T A A G T C A G C T A G T C C G T A A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:WCYYWTGACAAAT----
-GTATTGACAGGTNNTT
 C G T A A G T C A G C T A G T C C G T A A C G T A C T G C G T A G T A C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T