Information for 3-GTTTACTTAG (Motif 5)

C T A G C G A T A C G T A C G T G T C A A G T C G A C T A C G T C G T A C T A G
Reverse Opposite:
G A T C C G A T T G C A C T G A C T A G C A G T T G C A C G T A C G T A G A T C
p-value:1e-13
log p-value:-3.167e+01
Information Content per bp:1.684
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.23%
Number of Background Sequences with motif873.8
Percentage of Background Sequences with motif1.79%
Average Position of motif in Targets44.2 +/- 22.7bp
Average Position of motif in Background49.7 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2/MA0047.2/Jaspar

Match Rank:1
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GTTTACTTAG-
TGTTTACTTAGG
 A C G T C T A G C G A T A C G T A C G T G T C A A G T C G A C T A C G T C G T A C T A G A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GTTTACTTAG
TGTTTACTTT-
 A C G T C T A G C G A T A C G T A C G T G T C A A G T C G A C T A C G T C G T A C T A G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GTTTACTTAG
TGTTTACTTT-
 A C G T C T A G C G A T A C G T A C G T G T C A A G T C G A C T A C G T C G T A C T A G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.81
Offset:-5
Orientation:forward strand
Alignment:-----GTTTACTTAG
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T A C G T C T A G C G A T A C G T A C G T G T C A A G T C G A C T A C G T C G T A C T A G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----GTTTACTTAG-
BSNTGTTTACWYWGN
 A C G T A C G T A C G T A C G T C T A G C G A T A C G T A C G T G T C A A G T C G A C T A C G T C G T A C T A G A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GTTTACTTAG
TTTGTTTACTTA-
 A C G T A C G T A C G T C T A G C G A T A C G T A C G T G T C A A G T C G A C T A C G T C G T A C T A G
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---GTTTACTTAG
CNTGTTTACATA-
 A C G T A C G T A C G T C T A G C G A T A C G T A C G T G T C A A G T C G A C T A C G T C G T A C T A G
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:8
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GTTTACTTAG
TRTTTACTTW-
 A C G T C T A G C G A T A C G T A C G T G T C A A G T C G A C T A C G T C G T A C T A G
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GTTTACTTAG
TNTGTTTACTT--
 A C G T A C G T A C G T C T A G C G A T A C G T A C G T G T C A A G T C G A C T A C G T C G T A C T A G
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GTTTACTTAG
ATATTTACATA-
 A C G T A C G T C T A G C G A T A C G T A C G T G T C A A G T C G A C T A C G T C G T A C T A G
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T