Information for 6-GCCCWGGGCW (Motif 24)

A C T G A G T C A G T C A G T C C G A T A C T G A C T G A C T G A G T C G C A T
Reverse Opposite:
C G T A A C T G A G T C A G T C A G T C C G T A A C T G A C T G A C T G A G T C
p-value:1e-6
log p-value:-1.386e+01
Information Content per bp:1.911
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif98.6
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets44.5 +/- 23.5bp
Average Position of motif in Background53.5 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCCCWGGGCW
AGCCTCAGGCA
 A C G T A C T G A G T C A G T C A G T C C G A T A C T G A C T G A C T G A G T C G C A T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCCCWGGGCW
CGCCTCAGGCA
 A C G T A C T G A G T C A G T C A G T C C G A T A C T G A C T G A C T G A G T C G C A T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCCCWGGGCW
AGCCTCAGGCA
 A C G T A C T G A G T C A G T C A G T C C G A T A C T G A C T G A C T G A G T C G C A T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GCCCWGGGCW--
NTNGCCTCAGGCNNN
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C C G A T A C T G A C T G A C T G A G T C G C A T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCCCWGGGCW
WDNCTGGGCA
 A C T G A G T C A G T C A G T C C G A T A C T G A C T G A C T G A G T C G C A T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCCCWGGGCW-
TCCCCTGGGGAC
 A C G T A C T G A G T C A G T C A G T C C G A T A C T G A C T G A C T G A G T C G C A T A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCCCWGGGCW--
ANTGCCTGAGGCAAN
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C C G A T A C T G A C T G A C T G A G T C G C A T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCCCWGGGCW--
NTCGCCTCAGGCAAT
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C C G A T A C T G A C T G A C T G A G T C G C A T A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCCCWGGGCW
TGCCCCAGGGCA
 A C G T A C G T A C T G A G T C A G T C A G T C C G A T A C T G A C T G A C T G A G T C G C A T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCCCWGGGCW
TGCCCCAGGGCA
 A C G T A C G T A C T G A G T C A G T C A G T C C G A T A C T G A C T G A C T G A G T C G C A T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A