Information for 2-TCTCCTTCAG (Motif 15)

A G C T A G T C G C A T A G T C G T A C C G A T A C G T G T A C G T C A A T C G
Reverse Opposite:
T A G C C A G T A C T G T C G A C G T A A C T G A C T G C G T A T C A G C T G A
p-value:1e-8
log p-value:-2.005e+01
Information Content per bp:1.820
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.40%
Number of Background Sequences with motif342.6
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets54.5 +/- 24.9bp
Average Position of motif in Background51.5 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCTCCTTCAG
AAGATATCCTT---
 A C G T A C G T A C G T A C G T A G C T A G T C G C A T A G T C G T A C C G A T A C G T G T A C G T C A A T C G
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCTCCTTCAG
ATGACCTTGA-
 A C G T A G C T A G T C G C A T A G T C G T A C C G A T A C G T G T A C G T C A A T C G
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCCTTCAG
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C G C A T A G T C G T A C C G A T A C G T G T A C G T C A A T C G
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCTCCTTCAG
NTGACCTTGA-
 A C G T A G C T A G T C G C A T A G T C G T A C C G A T A C G T G T A C G T C A A T C G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCTCCTTCAG
TGACCTTGAV
 A G C T A G T C G C A T A G T C G T A C C G A T A C G T G T A C G T C A A T C G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TCTCCTTCAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G C A T A G T C G T A C C G A T A C G T G T A C G T C A A T C G A C G T A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TCTCCTTCAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G C A T A G T C G T A C C G A T A C G T G T A C G T C A A T C G A C G T A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCTCCTTCAG
BNTGDCCTTG--
 A C G T A C G T A G C T A G T C G C A T A G T C G T A C C G A T A C G T G T A C G T C A A T C G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCTCCTTCAG
TGACCTTGAN
 A G C T A G T C G C A T A G T C G T A C C G A T A C G T G T A C G T C A A T C G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCTCCTTCAG
NATGACCTTGA-
 A C G T A C G T A G C T A G T C G C A T A G T C G T A C C G A T A C G T G T A C G T C A A T C G
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T