Information for 10-CCKYGTRATSTRT (Motif 24)

A G T C A G T C A C G T A G C T A C T G A C G T C T G A C G T A A C G T A T C G A C G T C T A G A G C T
Reverse Opposite:
C T G A A G T C C G T A A T G C C G T A A C G T A G C T C G T A A G T C C T G A G T C A A C T G A C T G
p-value:1e-7
log p-value:-1.756e+01
Information Content per bp:1.852
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 19.6bp
Average Position of motif in Background46.7 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCKYGTRATSTRT
NCACGTGACN---
 A G T C A G T C A C G T A G C T A C T G A C G T C T G A C G T A A C G T A T C G A C G T C T A G A G C T
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCKYGTRATSTRT
---YSTTATCT--
 A G T C A G T C A C G T A G C T A C T G A C G T C T G A C G T A A C G T A T C G A C G T C T A G A G C T
A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCKYGTRATSTRT
ACCACGTGAC----
 A C G T A G T C A G T C A C G T A G C T A C T G A C G T C T G A C G T A A C G T A T C G A C G T C T A G A G C T
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCKYGTRATSTRT-
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A G T C A G T C A C G T A G C T A C T G A C G T C T G A C G T A A C G T A T C G A C G T C T A G A G C T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCKYGTRATSTRT
KCCACGTGAC----
 A C G T A G T C A G T C A C G T A G C T A C T G A C G T C T G A C G T A A C G T A T C G A C G T C T A G A G C T
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCKYGTRATSTRT
AACCCTTTGATCTTT
 A C G T A C G T A G T C A G T C A C G T A G C T A C T G A C G T C T G A C G T A A C G T A T C G A C G T C T A G A G C T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCKYGTRATSTRT
-CCTTTGATCTTT
 A G T C A G T C A C G T A G C T A C T G A C G T C T G A C G T A A C G T A T C G A C G T C T A G A G C T
A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCKYGTRATSTRT----
----NTGATTTATGGCC
 A G T C A G T C A C G T A G C T A C T G A C G T C T G A C G T A A C G T A T C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCKYGTRATSTRT
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A G T C A G T C A C G T A G C T A C T G A C G T C T G A C G T A A C G T A T C G A C G T C T A G A G C T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

USF1/MA0093.2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCKYGTRATSTRT
GCCACGTGACC---
 A C G T A G T C A G T C A C G T A G C T A C T G A C G T C T G A C G T A A C G T A T C G A C G T C T A G A G C T
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T A C G T