Information for 5-GCTACAAGTT (Motif 19)

A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C G T A C G T C T A G A C G T C G T A A C T G A G T C
p-value:1e-8
log p-value:-2.032e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 23.9bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTACAAGTT-
-NNATAAGGNN
 A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCTACAAGTT-
ATGCAACAGGTGG
 A C G T A C G T A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SCRT1/MA0743.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCTACAAGTT---
GAGCAACAGGTGGTT
 A C G T A C G T A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCTACAAGTT-----
AATATACATGTAATATA
 A C G T A C G T A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCTACAAGTT-----
AAAATACATGTAATACT
 A C G T A C G T A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCTACAAGTT-----
AATATACATGTAAAACA
 A C G T A C G T A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCTACAAGTT-----
AATATACATGTAAAATT
 A C G T A C G T A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCTACAAGTT--
ACATGCTACCTAATAC
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCTACAAGTT
NTTGATACATT--
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTACAAGTT--
GCTATAAATAGC
 A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C