Information for 15-CCTGCTSAAATTCTGT (Motif 18)

A G T C G A T C A C G T A T C G G T A C A G C T T A C G T G C A C G T A G T C A A C G T A C G T A G T C A G C T A C T G A C G T
Reverse Opposite:
G T C A T G A C C T G A A C T G T G C A C G T A C A G T A C G T A C G T A T G C C T G A A C T G T A G C C G T A C T A G T C A G
p-value:1e-9
log p-value:-2.117e+01
Information Content per bp:1.723
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.9 +/- 19.2bp
Average Position of motif in Background48.5 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCTGCTSAAATTCTGT
-ATGATGCAAT-----
 A G T C G A T C A C G T A T C G G T A C A G C T T A C G T G C A C G T A G T C A A C G T A C G T A G T C A G C T A C T G A C G T
A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCTGCTSAAATTCTGT
-MTGATGCAAT-----
 A G T C G A T C A C G T A T C G G T A C A G C T T A C G T G C A C G T A G T C A A C G T A C G T A G T C A G C T A C T G A C G T
A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCTGCTSAAATTCTGT
CCTGCTGAGH------
 A G T C G A T C A C G T A T C G G T A C A G C T T A C G T G C A C G T A G T C A A C G T A C G T A G T C A G C T A C T G A C G T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:4
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CCTGCTSAAATTCTGT
----CACTAATT----
 A G T C G A T C A C G T A T C G G T A C A G C T T A C G T G C A C G T A G T C A A C G T A C G T A G T C A G C T A C T G A C G T
A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.49
Offset:11
Orientation:forward strand
Alignment:CCTGCTSAAATTCTGT-
-----------GCTGTG
 A G T C G A T C A C G T A T C G G T A C A G C T T A C G T G C A C G T A G T C A A C G T A C G T A G T C A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTSAAATTCTGT
CCCCCTGCTGTG-------
 A C G T A C G T A C G T A G T C G A T C A C G T A T C G G T A C A G C T T A C G T G C A C G T A G T C A A C G T A C G T A G T C A G C T A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTSAAATTCTGT
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A G T C G A T C A C G T A T C G G T A C A G C T T A C G T G C A C G T A G T C A A C G T A C G T A G T C A G C T A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTSAAATTCTGT
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A G T C G A T C A C G T A T C G G T A C A G C T T A C G T G C A C G T A G T C A A C G T A C G T A G T C A G C T A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTSAAATTCTGT
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A G T C G A T C A C G T A T C G G T A C A G C T T A C G T G C A C G T A G T C A A C G T A C G T A G T C A G C T A C T G A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CCTGCTSAAATTCTGT
---GTTTCACTTCCG-
 A G T C G A T C A C G T A T C G G T A C A G C T T A C G T G C A C G T A G T C A A C G T A C G T A G T C A G C T A C T G A C G T
A C G T A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T