Information for 4-GGACTACADATCC (Motif 6)

T C A G T C A G C G T A T A G C C G A T T C G A A G T C G C T A C T G A G C T A A G C T G A T C G A T C
Reverse Opposite:
C T A G C T A G C T G A C G A T G A C T C A G T A C T G A G C T G C T A A T C G G A C T A G T C A G T C
p-value:1e-12
log p-value:-2.842e+01
Information Content per bp:1.697
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif75.6
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets50.6 +/- 24.4bp
Average Position of motif in Background45.1 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GGACTACADATCC-
--ACTACAATTCCC
 T C A G T C A G C G T A T A G C C G A T T C G A A G T C G C T A C T G A G C T A A G C T G A T C G A T C A C G T
A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GGACTACADATCC--------
-RACTACAACTCCCAGVAKGC
 T C A G T C A G C G T A T A G C C G A T T C G A A G T C G C T A C T G A G C T A A G C T G A T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GGACTACADATCC--------
-AACTACAATTCCCAGAATGC
 T C A G T C A G C G T A T A G C C G A T T C G A A G T C G C T A C T G A G C T A A G C T G A T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGACTACADATCC--
----AAGATATCCTT
 T C A G T C A G C G T A T A G C C G A T T C G A A G T C G C T A C T G A G C T A A G C T G A T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

PH0138.1_Pitx2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGACTACADATCC-----
-GNNNATTAATCCCTNCN
 T C A G T C A G C G T A T A G C C G A T T C G A A G T C G C T A C T G A G C T A A G C T G A T C G A T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GGACTACADATCC
-----ACATATGG
 T C A G T C A G C G T A T A G C C G A T T C G A A G T C G C T A C T G A G C T A A G C T G A T C G A T C
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GGACTACADATCC-
------ATAATCCC
 T C A G T C A G C G T A T A G C C G A T T C G A A G T C G C T A C T G A G C T A A G C T G A T C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGACTACADATCC---
----ACCACATCCTGT
 T C A G T C A G C G T A T A G C C G A T T C G A A G T C G C T A C T G A G C T A A G C T G A T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGACTACADATCC-
ATTTACGACAAATAGC
 A C G T A C G T T C A G T C A G C G T A T A G C C G A T T C G A A G T C G C T A C T G A G C T A A G C T G A T C G A T C A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGACTACADATCC
NWAACCACADNN--
 A C G T T C A G T C A G C G T A T A G C C G A T T C G A A G T C G C T A C T G A G C T A A G C T G A T C G A T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T