Information for 12-RGRCTCCNGGARS (Motif 20)

T C A G T A C G T C A G A G T C C A G T A G T C A T G C T G A C A C T G C T A G C G T A C T A G A T G C
Reverse Opposite:
A T C G A G T C G C A T A G T C T G A C A C T G A T C G C T A G G T C A T C A G A G T C A T G C A G T C
p-value:1e-7
log p-value:-1.808e+01
Information Content per bp:1.583
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif36.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets47.6 +/- 22.1bp
Average Position of motif in Background49.4 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:RGRCTCCNGGARS
---TTCCNGGAAG
 T C A G T A C G T C A G A G T C C A G T A G T C A T G C T G A C A C T G C T A G C G T A C T A G A T G C
A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:RGRCTCCNGGARS-
NNCTTCCNGGAAGN
 T C A G T A C G T C A G A G T C C A G T A G T C A T G C T G A C A C T G C T A G C G T A C T A G A T G C A C G T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--RGRCTCCNGGARS
NNNCTTTCCAGGAAA
 A C G T A C G T T C A G T A C G T C A G A G T C C A G T A G T C A T G C T G A C A C T G C T A G C G T A C T A G A T G C
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:RGRCTCCNGGARS
-NTTTCCNGGAAA
 T C A G T A C G T C A G A G T C C A G T A G T C A T G C T G A C A C T G C T A G C G T A C T A G A T G C
A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:RGRCTCCNGGARS
--TTTCCTGGAAA
 T C A G T A C G T C A G A G T C C A G T A G T C A T G C T G A C A C T G C T A G C G T A C T A G A T G C
A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

Gabpa/MA0062.2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-RGRCTCCNGGARS
NCCACTTCCGG---
 A C G T T C A G T A C G T C A G A G T C C A G T A G T C A T G C T G A C A C T G C T A G C G T A C T A G A T G C
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:RGRCTCCNGGARS-
NATTTCCNGGAAAT
 T C A G T A C G T C A G A G T C C A G T A G T C A T G C T G A C A C T G C T A G C G T A C T A G A T G C A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

STAT3/MA0144.2/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:RGRCTCCNGGARS
--TTTCCCAGAAN
 T C A G T A C G T C A G A G T C C A G T A G T C A T G C T G A C A C T G C T A G C G T A C T A G A T G C
A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:RGRCTCCNGGARS-
----ANCAGGATGT
 T C A G T A C G T C A G A G T C C A G T A G T C A T G C T G A C A C T G C T A G C G T A C T A G A T G C A C G T
A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

ELK4/MA0076.2/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RGRCTCCNGGARS
CCACTTCCGGC--
 T C A G T A C G T C A G A G T C C A G T A G T C A T G C T G A C A C T G C T A G C G T A C T A G A T G C
A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T A C G T