Information for 21-AAAAGGCGCG (Motif 28)

C G T A C G T A C G T A T C G A A C T G T C A G G A T C C T A G A G T C C T A G
Reverse Opposite:
A G T C T C A G A G T C C T A G A G T C A G T C A G C T A C G T A C G T A C G T
p-value:1e-12
log p-value:-2.775e+01
Information Content per bp:1.729
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets44.5 +/- 23.8bp
Average Position of motif in Background53.1 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AAAAGGCGCG
ANGNAAAGGTCA--
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A T C G A A C T G T C A G G A T C C T A G A G T C C T A G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------AAAAGGCGCG
GNCTATAAAAGG----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A T C G A A C T G T C A G G A T C C T A G A G T C C T A G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AAAAGGCGCG
RACAAWGG-----
 A C G T A C G T A C G T C G T A C G T A C G T A T C G A A C T G T C A G G A T C C T A G A G T C C T A G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AAAAGGCGCG
AAAACAAAGG-----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A T C G A A C T G T C A G G A T C C T A G A G T C C T A G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAAAGGCGCG--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A T C G A A C T G T C A G G A T C C T A G A G T C C T A G A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

BARHL2/MA0635.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAAAGGCGCG
GCTAAACGGT---
 A C G T A C G T A C G T C G T A C G T A C G T A T C G A A C T G T C A G G A T C C T A G A G T C C T A G
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAAAGGCGCG--
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A T C G A A C T G T C A G G A T C C T A G A G T C C T A G A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAAAGGCGCG-
GGAGAAAGGTGCGA
 A C G T A C G T A C G T C G T A C G T A C G T A T C G A A C T G T C A G G A T C C T A G A G T C C T A G A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAAGGCGCG----
ATAAGGGCGCGCGAT
 A C G T C G T A C G T A C G T A T C G A A C T G T C A G G A T C C T A G A G T C C T A G A C G T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAAAGGCGCG
NNATAAGGNN--
 A C G T A C G T C G T A C G T A C G T A T C G A A C T G T C A G G A T C C T A G A G T C C T A G
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T