Information for 16-CGAGGATTCTCGG (Motif 27)

A T G C A T C G T C G A C A T G A T C G T G C A A C G T A G C T A T G C A G C T T A G C T C A G A C T G
Reverse Opposite:
T G A C A G T C A T C G T C G A A T C G T C G A T G C A A C G T T A G C G A T C A C G T A T G C T A C G
p-value:1e-12
log p-value:-2.884e+01
Information Content per bp:1.673
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets41.7 +/- 31.2bp
Average Position of motif in Background61.9 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGAGGATTCTCGG----
--AGTATTCTCGGTTGC
 A T G C A T C G T C G A C A T G A T C G T G C A A C G T A G C T A T G C A G C T T A G C T C A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGAGGATTCTCGG----
--NNAATTCTCGNTNAN
 A T G C A T C G T C G A C A T G A T C G T G C A A C G T A G C T A T G C A G C T T A G C T C A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGAGGATTCTCGG-
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A T G C A T C G T C G A C A T G A T C G T G C A A C G T A G C T A T G C A G C T T A G C T C A G A C T G A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGAGGATTCTCGG----
--ACCACTCTCGGTCAC
 A T G C A T C G T C G A C A T G A T C G T G C A A C G T A G C T A T G C A G C T T A G C T C A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGAGGATTCTCGG----
--RGSMTBCTGGGAAAT
 A T G C A T C G T C G A C A T G A T C G T G C A A C G T A G C T A T G C A G C T T A G C T C A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGAGGATTCTCGG
-GGGGATTCCCCC
 A T G C A T C G T C G A C A T G A T C G T G C A A C G T A G C T A T G C A G C T T A G C T C A G A C T G
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB1/MA0105.4/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CGAGGATTCTCGG
AGGGGATTCCCCT
 A T G C A T C G T C G A C A T G A T C G T G C A A C G T A G C T A T G C A G C T T A G C T C A G A C T G
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

HSF4/MA0771.1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CGAGGATTCTCGG-
-GAANNTTCTAGAA
 A T G C A T C G T C G A C A T G A T C G T G C A A C G T A G C T A T G C A G C T T A G C T C A G A C T G A C G T
A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CGAGGATTCTCGG--
AGGGGGATTAGCTGCC
 A C G T A T G C A T C G T C G A C A T G A T C G T G C A A C G T A G C T A T G C A G C T T A G C T C A G A C T G A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:CGAGGATTCTCGG----
------TTCTTGGAAAN
 A T G C A T C G T C G A C A T G A T C G T G C A A C G T A G C T A T G C A G C T T A G C T C A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T