Information for 18-AAGGCCGGVC (Motif 25)

T G C A G C T A A C T G C T A G A G T C A T G C C T A G T A C G T G C A G A T C
Reverse Opposite:
C T A G A C G T A T G C A G T C T A C G A C T G A G T C A G T C C A G T A C G T
p-value:1e-12
log p-value:-2.884e+01
Information Content per bp:1.757
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets59.6 +/- 28.1bp
Average Position of motif in Background71.0 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAGGCCGGVC--
ACATGCCCGGGCAT
 A C G T A C G T T G C A G C T A A C T G C T A G A G T C A T G C C T A G T A C G T G C A G A T C A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AAGGCCGGVC----
CAGGCCNNGGCCNN
 T G C A G C T A A C T G C T A G A G T C A T G C C T A G T A C G T G C A G A T C A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAGGCCGGVC---
CAAAGGCGTGGCCAG
 A C G T A C G T T G C A G C T A A C T G C T A G A G T C A T G C C T A G T A C G T G C A G A T C A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGGCCGGVC
-AGGCCTNG-
 T G C A G C T A A C T G C T A G A G T C A T G C C T A G T A C G T G C A G A T C
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCCGGVC
CTAGGCCT---
 A C G T T G C A G C T A A C T G C T A G A G T C A T G C C T A G T A C G T G C A G A T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAGGCCGGVC
GAGSCCGAGC
 T G C A G C T A A C T G C T A G A G T C A T G C C T A G T A C G T G C A G A T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AAGGCCGGVC
GGGNGGGGGCGGGGC
 A C G T A C G T A C G T A C G T A C G T T G C A G C T A A C T G C T A G A G T C A T G C C T A G T A C G T G C A G A T C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAGGCCGGVC
NTCAAGGTCA---
 A C G T A C G T A C G T T G C A G C T A A C T G C T A G A G T C A T G C C T A G T A C G T G C A G A T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGGCCGGVC
CAAGGHCANV-
 A C G T T G C A G C T A A C T G C T A G A G T C A T G C C T A G T A C G T G C A G A T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AAGGCCGGVC
AAGTTCAAGGTCAGC-
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C T A A C T G C T A G A G T C A T G C C T A G T A C G T G C A G A T C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T