Information for 3-CSAGCMCCWRAGRWAG (Motif 10)

A G T C A T G C C G T A C T A G A G T C G T A C A G T C A G T C C G T A C T G A C G T A C T A G C T A G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T G C A T A G T C A G T C A C G T A G C T C G A T A C T G A C T G A C T G A C T G A G T C C G A T A T C G A C T G
p-value:1e-10
log p-value:-2.489e+01
Information Content per bp:1.847
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 26.3bp
Average Position of motif in Background53.6 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CSAGCMCCWRAGRWAG----
TTCAGCACCATGGACAGCGCC
 A C G T A G T C A T G C C G T A C T A G A G T C G T A C A G T C A G T C C G T A C T G A C G T A C T A G C T A G C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CSAGCMCCWRAGRWAG----
TCAGCACCATGGACAGCTCC
 A G T C A T G C C G T A C T A G A G T C G T A C A G T C A G T C C G T A C T G A C G T A C T A G C T A G C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

ZBTB7B/MA0694.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CSAGCMCCWRAGRWAG
GCGACCACCGAA-----
 A C G T A G T C A T G C C G T A C T A G A G T C G T A C A G T C A G T C C G T A C T G A C G T A C T A G C T A G C G T A C G T A A C T G
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CSAGCMCCWRAGRWAG
ATCCCCGCCCCTAAAA---
 A C G T A C G T A C G T A G T C A T G C C G T A C T A G A G T C G T A C A G T C A G T C C G T A C T G A C G T A C T A G C T A G C G T A C G T A A C T G
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CSAGCMCCWRAGRWAG
--GTCCCCAGGGGA--
 A G T C A T G C C G T A C T A G A G T C G T A C A G T C A G T C C G T A C T G A C G T A C T A G C T A G C G T A C G T A A C T G
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CSAGCMCCWRAGRWAG
GCGACCACCGAA-----
 A C G T A G T C A T G C C G T A C T A G A G T C G T A C A G T C A G T C C G T A C T G A C G T A C T A G C T A G C G T A C G T A A C T G
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CSAGCMCCWRAGRWAG
-CAGCC----------
 A G T C A T G C C G T A C T A G A G T C G T A C A G T C A G T C C G T A C T G A C G T A C T A G C T A G C G T A C G T A A C T G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CSAGCMCCWRAGRWAG--
--------AGAGGAAGTG
 A G T C A T G C C G T A C T A G A G T C G T A C A G T C A G T C C G T A C T G A C G T A C T A G C T A G C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CSAGCMCCWRAGRWAG
--TGCCCTGAGGGCA-
 A G T C A T G C C G T A C T A G A G T C G T A C A G T C A G T C C G T A C T G A C G T A C T A G C T A G C G T A C G T A A C T G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CSAGCMCCWRAGRWAG
------CCATATATGG
 A G T C A T G C C G T A C T A G A G T C G T A C A G T C A G T C C G T A C T G A C G T A C T A G C T A G C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G