Information for 16-CCACCCAAGG (Motif 22)

A T G C A T G C C G T A A T G C A G T C A G T C C G T A C G T A A C T G C T A G
Reverse Opposite:
A G T C A G T C A C G T A C G T A C T G A C T G A T C G C G A T A T C G A T C G
p-value:1e-6
log p-value:-1.515e+01
Information Content per bp:1.864
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif66.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets48.0 +/- 28.7bp
Average Position of motif in Background51.0 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CCACCCAAGG
GGACCACCCACG-
 A C G T A C G T A C G T A T G C A T G C C G T A A T G C A G T C A G T C C G T A C G T A A C T G C T A G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCACCCAAGG
AGCCACTCAAG-
 A C G T A C G T A T G C A T G C C G T A A T G C A G T C A G T C C G T A C G T A A C T G C T A G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

Znf423/MA0116.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCACCCAAGG----
GGCACCCAGGGGTGC
 A C G T A T G C A T G C C G T A A T G C A G T C A G T C C G T A C G T A A C T G C T A G A C G T A C G T A C G T A C G T
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

PB0167.1_Sox13_2/Jaspar

Match Rank:4
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------CCACCCAAGG-
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A T G C C G T A A T G C A G T C A G T C C G T A C G T A A C T G C T A G A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCACCCAAGG---
---NTCAAGGTCA
 A T G C A T G C C G T A A T G C A G T C A G T C C G T A C G T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCACCCAAGG---
---BTCAAGGTCA
 A T G C A T G C C G T A A T G C A G T C A G T C C G T A C G T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCACCCAAGG-
YCCGCCCACGCN
 A C G T A T G C A T G C C G T A A T G C A G T C A G T C C G T A C G T A A C T G C T A G A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCACCCAAGG
--TGCCAA--
 A T G C A T G C C G T A A T G C A G T C A G T C C G T A C G T A A C T G C T A G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCACCCAAGG
GCGACCACCGAA--
 A C G T A C G T A C G T A C G T A T G C A T G C C G T A A T G C A G T C A G T C C G T A C G T A A C T G C T A G
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCACCCAAGG
GGCCACACCCA---
 A C G T A C G T A C G T A C G T A T G C A T G C C G T A A T G C A G T C A G T C C G T A C G T A A C T G C T A G
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T