Information for 18-ACACGTACATCCA (Motif 20)

T C G A A G T C G T C A A G T C A C T G A C G T C T G A A T G C C G T A A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A A C G T A T C G A G C T C G T A A G T C A C T G A C G T A C T G A C G T
p-value:1e-6
log p-value:-1.587e+01
Information Content per bp:1.927
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.0 +/- 31.1bp
Average Position of motif in Background42.1 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACACGTACATCCA
GCACGTNC-----
 T C G A A G T C G T C A A G T C A C T G A C G T C T G A A T G C C G T A A C G T A G T C A G T C C G T A
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACACGTACATCCA
GCACGTACCC---
 T C G A A G T C G T C A A G T C A C T G A C G T C T G A A T G C C G T A A C G T A G T C A G T C C G T A
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACACGTACATCCA
NACACGTGCN----
 A C G T T C G A A G T C G T C A A G T C A C T G A C G T C T G A A T G C C G T A A C G T A G T C A G T C C G T A
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACACGTACATCCA
ACACGTGC-----
 T C G A A G T C G T C A A G T C A C T G A C G T C T G A A T G C C G T A A C G T A G T C A G T C C G T A
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACACGTACATCCA
GCACGTAY-----
 T C G A A G T C G T C A A G T C A C T G A C G T C T G A A T G C C G T A A C G T A G T C A G T C C G T A
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ACACGTACATCCA
TAACGACACGTGC-----
 A C G T A C G T A C G T A C G T A C G T T C G A A G T C G T C A A G T C A C T G A C G T C T G A A T G C C G T A A C G T A G T C A G T C C G T A
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACACGTACATCCA
BGCACGTA------
 A C G T T C G A A G T C G T C A A G T C A C T G A C G T C T G A A T G C C G T A A C G T A G T C A G T C C G T A
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACACGTACATCCA
-CACGTGBN----
 T C G A A G T C G T C A A G T C A C T G A C G T C T G A A T G C C G T A A C G T A G T C A G T C C G T A
A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACACGTACATCCA
-CACGTG------
 T C G A A G T C G T C A A G T C A C T G A C G T C T G A A T G C C G T A A C G T A G T C A G T C C G T A
A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACACGTACATCCA
ACCACGTGCC----
 A C G T T C G A A G T C G T C A A G T C A C T G A C G T C T G A A T G C C G T A A C G T A G T C A G T C C G T A
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T A C G T A C G T