Information for 1-GGGGAACCTC (Motif 7)

A C T G A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C T G A C G T A C G T A G T C A G T C A G T C A G T C
p-value:1e-4
log p-value:-1.118e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets22.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGGGAACCTC
TGGGGA-----
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A G T C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GGGGAACCTC--
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGGGAACCTC-
GGGGGAATCCCC
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A G T C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGGAACCTC--
AGGGGAATCCCCT
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAACCTC--
AGGGGAATCCCCT
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGGAACCTC
AGAGGAA----
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A G T C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:7
Score:0.62
Offset:-8
Orientation:reverse strand
Alignment:--------GGGGAACCTC
ANTNCCGGGGGGAANTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A G T C
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGGAACCTC-
-GGGAATTTCC
 A C T G A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A G T C A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGGGAACCTC--
--GGAAATTCCC
 A C T G A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGGGAACCTC
TTAAGAGGAAGTTA
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A G T C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C