Information for 19-TAGATTTTCATCG (Motif 19)

A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C G T A C T G C G T A C G T A C G T A C G T A A C G T A G T C A C G T C G T A
p-value:1e-4
log p-value:-1.118e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAGATTTTCATCG-
NNAGATNVNWATCTN
 A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C T G A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TAGATTTTCATCG
BTVATTWGCATA-
 A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C T G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TAGATTTTCATCG
---ATTTGCATA-
 A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C T G
A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TAGATTTTCATCG
CTCATTTGCATW-
 A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C T G
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAGATTTTCATCG
TTCATTTGCATAT
 A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TAGATTTTCATCG
---ATTTGCATAA
 A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C T G
A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TAGATTTTCATCG
---ATTTGCATAT
 A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C T G
A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TAGATTTTCATCG
---ATTTGCATA-
 A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C T G
A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TAGATTTTCATCG----
-NGANTTTTATGGCTCN
 A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A C G T G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TAGATTTTCATCG--
TNTAATTTGCATANNN
 A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C T G A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A