Information for 6-GTTTATTCAGATC (Motif 12)

A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A G T C
p-value:1e-4
log p-value:-1.118e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTTTATTCAGATC
TATTGTTTATT------
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTTATTCAGATC
GHATATKCAT---
 A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTTTATTCAGATC
TGTTTATTT-----
 A C G T A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTTTATTCAGATC
--TTATGCAAAT-
 A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTTTATTCAGATC-
GAGTTCATTGAGTTCA
 A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C A C G T
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTTTATTCAGATC
NTGTTTAYATWW---
 A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTTTATTCAGATC
---TATGCAAAT-
 A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTTTATTCAGATC
GAATATTCAT---
 A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTTTATTCAGATC
CBTGTTTAYAWW----
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTTTATTCAGATC---
TTGTATGCAAATTAGA
 A C T G A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A