Information for 1-ATWACTCWTTAMAGTG (Motif 1)

C T G A C G A T C G A T C T G A G T A C G A C T T G A C C G T A A C G T C G A T G C T A G T A C T C G A A C T G A C G T C A T G
Reverse Opposite:
G A T C C G T A A G T C A C G T A C T G C G A T C G T A T G C A C G A T A C T G C G T A A C T G A G C T C G T A G C T A A G C T
p-value:1e-7
log p-value:-1.637e+01
Information Content per bp:1.641
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif60.00%
Number of Background Sequences with motif710.8
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets51.7 +/- 14.6bp
Average Position of motif in Background46.2 +/- 67.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:ATWACTCWTTAMAGTG-
--------NTCAAGTGG
 C T G A C G A T C G A T C T G A G T A C G A C T T G A C C G T A A C G T C G A T G C T A G T A C T C G A A C T G A C G T C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:ATWACTCWTTAMAGTG--
--------NTCAAGTGGN
 C T G A C G A T C G A T C T G A G T A C G A C T T G A C C G T A A C G T C G A T G C T A G T A C T C G A A C T G A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

SOX8/MA0868.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ATWACTCWTTAMAGTG--
--AACAATGTGCAGTGTT
 C T G A C G A T C G A T C T G A G T A C G A C T T G A C C G T A A C G T C G A T G C T A G T A C T C G A A C T G A C G T C A T G A C G T A C G T
A C G T A C G T C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ATWACTCWTTAMAGTG-----
-----AAATTCAAGTGGNTTN
 C T G A C G A T C G A T C T G A G T A C G A C T T G A C C G T A A C G T C G A T G C T A G T A C T C G A A C T G A C G T C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATWACTCWTTAMAGTG-----
----NANTTTCAAGTGGTTAN
 C T G A C G A T C G A T C T G A G T A C G A C T T G A C C G T A A C G T C G A T G C T A G T A C T C G A A C T G A C G T C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:ATWACTCWTTAMAGTG-----
-----AATTTCAAGTGGCTTN
 C T G A C G A T C G A T C T G A G T A C G A C T T G A C C G T A A C G T C G A T G C T A G T A C T C G A A C T G A C G T C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PH0108.1_Msx3/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATWACTCWTTAMAGTG
CAAAACCAATTAATTT-
 A C G T C T G A C G A T C G A T C T G A G T A C G A C T T G A C C G T A A C G T C G A T G C T A G T A C T C G A A C T G A C G T C A T G
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T A C G T

SOX4/MA0867.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ATWACTCWTTAMAGTG--
--GAACAATTGCAGTGTT
 C T G A C G A T C G A T C T G A G T A C G A C T T G A C C G T A A C G T C G A T G C T A G T A C T C G A A C T G A C G T C A T G A C G T A C G T
A C G T A C G T C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

Sox11/MA0869.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:ATWACTCWTTAMAGTG--
---AACAATTTCAGTGTT
 C T G A C G A T C G A T C T G A G T A C G A C T T G A C C G T A A C G T C G A T G C T A G T A C T C G A A C T G A C G T C A T G A C G T A C G T
A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

PH0052.1_Hoxa5/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATWACTCWTTAMAGTG
NTGAGCTAATTACCNT-
 A C G T C T G A C G A T C G A T C T G A G T A C G A C T T G A C C G T A A C G T C G A T G C T A G T A C T C G A A C T G A C G T C A T G
G A T C G C A T C A T G C G T A C T A G A T G C G A C T G T C A G T C A A C G T A C G T C T G A T G A C G A T C A C T G A G C T A C G T