Information for 6-TTGAMTTCGNTCTGGA (Motif 6)

A C G T A C G T A C T G C T G A G T A C A C G T A C G T G A T C C A T G A T C G A G C T A G T C C G A T A C T G A C T G G T C A
Reverse Opposite:
C A G T T A G C A G T C C G T A A C T G C T G A A T G C G T A C C T A G C G T A C G T A A C T G A G C T G T A C G T C A C G T A
p-value:1e-13
log p-value:-3.148e+01
Information Content per bp:1.746
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 16.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTGAMTTCGNTCTGGA
TTGACTTTT-------
 A C G T A C G T A C T G C T G A G T A C A C G T A C G T G A T C C A T G A T C G A G C T A G T C C G A T A C T G A C T G G T C A
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.60
Offset:8
Orientation:forward strand
Alignment:TTGAMTTCGNTCTGGA--
--------GGTCTGGCAT
 A C G T A C G T A C T G C T G A G T A C A C G T A C G T G A T C C A T G A T C G A G C T A G T C C G A T A C T G A C T G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTGAMTTCGNTCTGGA
TGGACTTTGNNCTCN-
 A C G T A C G T A C T G C T G A G T A C A C G T A C G T G A T C C A T G A T C G A G C T A G T C C G A T A C T G A C T G G T C A
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTGAMTTCGNTCTGGA
TGGACTTTGNNCTNTG
 A C G T A C G T A C T G C T G A G T A C A C G T A C G T G A T C C A T G A T C G A G C T A G T C C G A T A C T G A C T G G T C A
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTGAMTTCGNTCTGGA
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A C T G C T G A G T A C A C G T A C G T G A T C C A T G A T C G A G C T A G T C C G A T A C T G A C T G G T C A
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTGAMTTCGNTCTGGA
-TNCCTTTGATGT---
 A C G T A C G T A C T G C T G A G T A C A C G T A C G T G A T C C A T G A T C G A G C T A G T C C G A T A C T G A C T G G T C A
A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTGAMTTCGNTCTGGA----
---NNTNNTGTCTGGNNTNG
 A C G T A C G T A C T G C T G A G T A C A C G T A C G T G A T C C A T G A T C G A G C T A G T C C G A T A C T G A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTGAMTTCGNTCTGGA
AACCCTTTGATCTTT-
 A C G T A C G T A C T G C T G A G T A C A C G T A C G T G A T C C A T G A T C G A G C T A G T C C G A T A C T G A C T G G T C A
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTGAMTTCGNTCTGGA
ATTGGACTTTGACCCC--
 A C G T A C G T A C G T A C G T A C T G C T G A G T A C A C G T A C G T G A T C C A T G A T C G A G C T A G T C C G A T A C T G A C T G G T C A
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:7
Orientation:forward strand
Alignment:TTGAMTTCGNTCTGGA
-------CTGTCTGG-
 A C G T A C G T A C T G C T G A G T A C A C G T A C G T G A T C C A T G A T C G A G C T A G T C C G A T A C T G A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T