Information for 20-YTAGACACTAGWT (Motif 45)

A G C T A C G T C G T A A C T G C G T A A T G C G T C A A T G C G C A T C G T A C T A G G C A T A G C T
Reverse Opposite:
T C G A C G T A A G T C C G A T C G T A A T C G C A G T A T C G A C G T A G T C C G A T C G T A C T G A
p-value:1e-7
log p-value:-1.676e+01
Information Content per bp:1.742
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif31.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets31.1 +/- 20.7bp
Average Position of motif in Background56.3 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---YTAGACACTAGWT
CGTCTAGACA------
 A C G T A C G T A C G T A G C T A C G T C G T A A C T G C G T A A T G C G T C A A T G C G C A T C G T A C T A G G C A T A G C T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YTAGACACTAGWT
BCAGACWA-----
 A G C T A C G T C G T A A C T G C G T A A T G C G T C A A T G C G C A T C G T A C T A G G C A T A G C T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--YTAGACACTAGWT
GGTTAGAGACCT---
 A C G T A C G T A G C T A C G T C G T A A C T G C G T A A T G C G T C A A T G C G C A T C G T A C T A G G C A T A G C T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----YTAGACACTAGWT
CAAATCCAGACATCACA-
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C T G C G T A A T G C G T C A A T G C G C A T C G T A C T A G G C A T A G C T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:YTAGACACTAGWT
CCAGACAG-----
 A G C T A C G T C G T A A C T G C G T A A T G C G T C A A T G C G C A T C G T A C T A G G C A T A G C T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----YTAGACACTAGWT
NGNTCTAGAACCNGV--
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C T G C G T A A T G C G T C A A T G C G C A T C G T A C T A G G C A T A G C T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:YTAGACACTAGWT
CCAGACRSVB---
 A G C T A C G T C G T A A C T G C G T A A T G C G T C A A T G C G C A T C G T A C T A G G C A T A G C T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----YTAGACACTAGWT
NNGATCTAGAACCTNNN-
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C T G C G T A A T G C G T C A A T G C G C A T C G T A C T A G G C A T A G C T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----YTAGACACTAGWT
TATCATTAGAACGCT---
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C T G C G T A A T G C G T C A A T G C G C A T C G T A C T A G G C A T A G C T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----YTAGACACTAGWT
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C T G C G T A A T G C G T C A A T G C G C A T C G T A C T A G G C A T A G C T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T