Information for 15-TCAGCCTGGCTTA (Motif 39)

A C G T A T G C C G T A A C T G G T A C A G T C A C G T A C T G A C T G A G T C C G A T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C T G G T A C A G T C C G T A A C T G A C T G A G T C A C G T A T C G C G T A
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.8 +/- 32.2bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCAGCCTGGCTTA
--GGTCTGGCAT-
 A C G T A T G C C G T A A C T G G T A C A G T C A C G T A C T G A C T G A G T C C G A T A C G T C G T A
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TCAGCCTGGCTTA
-----NGGGATTA
 A C G T A T G C C G T A A C T G G T A C A G T C A C G T A C T G A C T G A G T C C G A T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

PB0185.1_Tcf1_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCAGCCTGGCTTA--
-TTGCCCGGATTAGG
 A C G T A T G C C G T A A C T G G T A C A G T C A C G T A C T G A C T G A G T C C G A T A C G T C G T A A C G T A C G T
A C G T C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TCAGCCTGGCTTA-
------NGGATTAN
 A C G T A T G C C G T A A C T G G T A C A G T C A C G T A C T G A C T G A G T C C G A T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TCAGCCTGGCTTA--
-------GGATTAGC
 A C G T A T G C C G T A A C T G G T A C A G T C A C G T A C T G A C T G A G T C C G A T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

ESR2/MA0258.2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCAGCCTGGCTTA
AGGTCACCCTGACCT-
 A C G T A C G T A C G T A C G T A T G C C G T A A C T G G T A C A G T C A C G T A C T G A C T G A G T C C G A T A C G T C G T A
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TCAGCCTGGCTTA--
------GGGATTANN
 A C G T A T G C C G T A A C T G G T A C A G T C A C G T A C T G A C T G A G T C C G A T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TCAGCCTGGCTTA-
------GGGATTAA
 A C G T A T G C C G T A A C T G G T A C A G T C A C G T A C T G A C T G A G T C C G A T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCAGCCTGGCTTA
BCAGACWA-----
 A C G T A T G C C G T A A C T G G T A C A G T C A C G T A C T G A C T G A G T C C G A T A C G T C G T A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCCTGGCTTA
GGTCANNGTGACCTN
 A C G T A C G T A C G T A T G C C G T A A C T G G T A C A G T C A C G T A C T G A C T G A G T C C G A T A C G T C G T A
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T