Information for 4-RAGAATARTWACA (Motif 14)

C T A G C T G A A C T G C G T A C G T A A C G T C G T A T C G A A C G T C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G A T C G T A A G C T A C G T C G T A A C G T A C G T A G T C A G C T A G T C
p-value:1e-9
log p-value:-2.194e+01
Information Content per bp:1.897
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets22.2 +/- 16.1bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0022.1_Dlx3/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-RAGAATARTWACA---
TCGCGATAATTACCGAC
 A C G T C T A G C T G A A C T G C G T A C G T A A C G T C G T A T C G A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:RAGAATARTWACA-----
---AAAAATAACAAACGG
 C T A G C T G A A C T G C G T A C G T A A C G T C G T A T C G A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:RAGAATARTWACA
---AATAATT---
 C T A G C T G A A C T G C G T A C G T A A C G T C G T A T C G A A C G T C G T A C G T A A G T C C G T A
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RAGAATARTWACA---
-CAAACAACAACACCT
 C T A G C T G A A C T G C G T A C G T A A C G T C G T A T C G A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0062.1_Sox12_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---RAGAATARTWACA
NTTNAGAACAATTA--
 A C G T A C G T A C G T C T A G C T G A A C T G C G T A C G T A A C G T C G T A T C G A A C G T C G T A C G T A A G T C C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--RAGAATARTWACA-
TTTAGAACAATAAAAT
 A C G T A C G T C T A G C T G A A C T G C G T A C G T A A C G T C G T A T C G A A C G T C G T A C G T A A G T C C G T A A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PH0072.1_Hoxc8/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:RAGAATARTWACA----
-ACNNTAATTACNNCAN
 C T A G C T G A A C T G C G T A C G T A A C G T C G T A T C G A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

FOXB1/MA0845.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:RAGAATARTWACA--
----ATATTTACATA
 C T A G C T G A A C T G C G T A C G T A A C G T C G T A T C G A A C G T C G T A C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

PH0021.1_Dlx2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RAGAATARTWACA----
-GGAATAATTACCTCAG
 C T A G C T G A A C T G C G T A C G T A A C G T C G T A T C G A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C T A G C T G A G A C T C G T A C G T A C G A T A C G T C T G A A T G C G A C T G A C T G T A C C T G A A C T G

PH0023.1_Dlx4/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RAGAATARTWACA---
GCGCTATAATTACCGAC
 A C G T C T A G C T G A A C T G C G T A C G T A A C G T C G T A T C G A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C