Information for 12-CATAAAGTCA (Motif 22)

A G T C C G T A A C G T C G T A C G T A C G T A C T A G A G C T A G T C C G T A
Reverse Opposite:
A C G T A C T G C T G A A G T C C G A T A C G T A C G T C G T A A C G T A C T G
p-value:1e-7
log p-value:-1.706e+01
Information Content per bp:1.929
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif41.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets46.5 +/- 25.7bp
Average Position of motif in Background49.1 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CATAAAGTCA-
--AAAAGTCAA
 A G T C C G T A A C G T C G T A C G T A C G T A C T A G A G C T A G T C C G T A A C G T
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CATAAAGTCA
NGYCATAAAWCH-
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C T A G A G C T A G T C C G T A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CATAAAGTCA
AAGCCATAAAA---
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C T A G A G C T A G T C C G T A
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CATAAAGTCA
GTCATAAAAN--
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C T A G A G C T A G T C C G T A
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CATAAAGTCA
GCAATAAAA---
 A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C T A G A G C T A G T C C G T A
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CATAAAGTCA--
GATGACGTCATC
 A G T C C G T A A C G T C G T A C G T A C G T A C T A G A G C T A G T C C G T A A C G T A C G T
T A C G T C G A A G C T C A T G G T C A A G T C T C A G G A C T T G A C T G C A A G C T T G A C

Creb5/MA0840.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CATAAAGTCA--
AATGACGTCACC
 A G T C C G T A A C G T C G T A C G T A C G T A C T A G A G C T A G T C C G T A A C G T A C G T
T C G A T C G A G A C T C A T G C G T A A G T C C T A G G C A T G T A C C G T A A G T C G A T C

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CATAAAGTCA---
-ATGACGTCATCN
 A G T C C G T A A C G T C G T A C G T A C G T A C T A G A G C T A G T C C G T A A C G T A C G T A C G T
A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CATAAAGTCA---
-ATGACGTCATCN
 A G T C C G T A A C G T C G T A C G T A C G T A C T A G A G C T A G T C C G T A A C G T A C G T A C G T
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

RARA/MA0729.1/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CATAAAGTCA---
GAGGTCAAAAGGTCAATG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A C T A G A G C T A G T C C G T A A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G