Information for 25-GGCGCTGGSKTAA (Motif 46)

A C T G A C T G A G T C A C T G A G T C A C G T A T C G A T C G A T G C A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A G T C A A T C G A T G C A T G C C G T A A C T G A G T C A C T G A G T C A G T C
p-value:1e-4
log p-value:-1.019e+01
Information Content per bp:1.885
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.2 +/- 22.8bp
Average Position of motif in Background88.4 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCGCTGGSKTAA
GGCGCGCT-----
 A C T G A C T G A G T C A C T G A G T C A C G T A T C G A T C G A T G C A C G T A C G T C G T A C G T A
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGCGCTGGSKTAA
--NGCTN------
 A C T G A C T G A G T C A C T G A G T C A C G T A T C G A T C G A T G C A C G T A C G T C G T A C G T A
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCTGGSKTAA
ATAAGGGCGCGCGAT---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A T C G A T C G A T G C A C G T A C G T C G T A C G T A
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCTGGSKTAA
ATAAAGGCGCGCGAT---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A T C G A T C G A T G C A C G T A C G T C G T A C G T A
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------GGCGCTGGSKTAA
NNNNTTGGCGCCGANNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A T C G A T C G A T G C A C G T A C G T C G T A C G T A
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------GGCGCTGGSKTAA
NNNNTTGGCGCCGANNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A T C G A T C G A T G C A C G T A C G T C G T A C G T A
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGCGCTGGSKTAA
TGCGCAGGCGC--
 A C T G A C T G A G T C A C T G A G T C A C G T A T C G A T C G A T G C A C G T A C G T C G T A C G T A
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GGCGCTGGSKTAA
CGGAGC--------
 A C G T A C T G A C T G A G T C A C T G A G T C A C G T A T C G A T C G A T G C A C G T A C G T C G T A C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GGCGCTGGSKTAA-------
---ACTTAGTTAACTAAAAA
 A C T G A C T G A G T C A C T G A G T C A C G T A T C G A T C G A T G C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0103.1_Meox1/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:GGCGCTGGSKTAA-------
----CTGAGGTAATTACCNC
 A C T G A C T G A G T C A C T G A G T C A C G T A T C G A T C G A T G C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C