Information for 7-TGGGATTAGM (Motif 26)

C G A T A C T G A C T G C T A G G T C A A C G T A C G T G C T A C T A G G T C A
Reverse Opposite:
C A G T A G T C C G A T T G C A G T C A A C G T A G T C A G T C G T A C C G T A
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.764
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.09%
Number of Background Sequences with motif288.4
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets50.5 +/- 27.7bp
Average Position of motif in Background49.1 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:TGGGATTAGM
-GGGATTANN
 C G A T A C T G A C T G C T A G G T C A A C G T A C G T G C T A C T A G G T C A
A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:2
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:TGGGATTAGM
-GGGATTAA-
 C G A T A C T G A C T G C T A G G T C A A C G T A C G T G C T A C T A G G T C A
A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:TGGGATTAGM
--GGATTAGC
 C G A T A C T G A C T G C T A G G T C A A C G T A C G T G C T A C T A G G T C A
A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.81
Offset:1
Orientation:forward strand
Alignment:TGGGATTAGM
-RGGATTAR-
 C G A T A C T G A C T G C T A G G T C A A C G T A C G T G C T A C T A G G T C A
A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TGGGATTAGM
NNGGATTAGN
 C G A T A C T G A C T G C T A G G T C A A C G T A C G T G C T A C T A G G T C A
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TGGGATTAGM
GNGGATTAGN
 C G A T A C T G A C T G C T A G G T C A A C G T A C G T G C T A C T A G G T C A
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TGGGATTAGM
NGGGATTA--
 C G A T A C T G A C T G C T A G G T C A A C G T A C G T G C T A C T A G G T C A
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGGGATTAGM
VRGGATTARN
 C G A T A C T G A C T G C T A G G T C A A C G T A C G T G C T A C T A G G T C A
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

OTX2/MA0712.1/Jaspar

Match Rank:9
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TGGGATTAGM
-NGGATTAA-
 C G A T A C T G A C T G C T A G G T C A A C G T A C G T G C T A C T A G G T C A
A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TGGGATTAGM----
AGGGGGATTAGCTGCC
 A C G T A C G T C G A T A C T G A C T G C T A G G T C A A C G T A C G T G C T A C T A G G T C A A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C