Information for 13-AAGGCAAHAAVTAGAA (Motif 24)

C T G A G T C A C T A G C T A G A G T C C G T A C T G A G T C A C T G A C G T A T C G A C G A T C T G A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T G T A C A G C T C G T A A C G T A C G T A G C T C A G T A G C T A C G T A C T G A G T C A G T C A C G T A G C T
p-value:1e-9
log p-value:-2.202e+01
Information Content per bp:1.790
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.5 +/- 20.3bp
Average Position of motif in Background53.3 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAGGCAAHAAVTAGAA--
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T C T G A G T C A C T A G C T A G A G T C C G T A C T G A G T C A C T G A C G T A T C G A C G A T C T G A A C T G C G T A C G T A A C G T A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGGCAAHAAVTAGAA
-ATGCTAAAAATAGAA
 C T G A G T C A C T A G C T A G A G T C C G T A C T G A G T C A C T G A C G T A T C G A C G A T C T G A A C T G C G T A C G T A
A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAGGCAAHAAVTAGAA
---TCTAAAAATAGA-
 C T G A G T C A C T A G C T A G A G T C C G T A C T G A G T C A C T G A C G T A T C G A C G A T C T G A A C T G C G T A C G T A
A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAGGCAAHAAVTAGAA
---ACTATAAATAGA-
 C T G A G T C A C T A G C T A G A G T C C G T A C T G A G T C A C T G A C G T A T C G A C G A T C T G A A C T G C G T A C G T A
A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAGGCAAHAAVTAGAA
---GCTAAAAATAGC-
 C T G A G T C A C T A G C T A G A G T C C G T A C T G A G T C A C T G A C G T A T C G A C G A T C T G A A C T G C G T A C G T A
A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AAGGCAAHAAVTAGAA
---GCTATAAATAGC-
 C T G A G T C A C T A G C T A G A G T C C G T A C T G A G T C A C T G A C G T A T C G A C G A T C T G A A C T G C G T A C G T A
A C G T A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AAGGCAAHAAVTAGAA
ACCGGCAATTAATAAA-
 A C G T C T G A G T C A C T A G C T A G A G T C C G T A C T G A G T C A C T G A C G T A T C G A C G A T C T G A A C T G C G T A C G T A
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAGGCAAHAAVTAGAA
TAGGTAATAAAATTCA
 C T G A G T C A C T A G C T A G A G T C C G T A C T G A G T C A C T G A C G T A T C G A C G A T C T G A A C T G C G T A C G T A
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AAGGCAAHAAVTAGAA
----CCAAAAATAG--
 C T G A G T C A C T A G C T A G A G T C C G T A C T G A G T C A C T G A C G T A T C G A C G A T C T G A A C T G C G T A C G T A
A C G T A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:forward strand
Alignment:AAGGCAAHAAVTAGAA---
-----AAAAAGCGGAAGTA
 C T G A G T C A C T A G C T A G A G T C C G T A C T G A G T C A C T G A C G T A T C G A C G A T C T G A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A