Information for 12-VACGCGCGCTGACCTG (Motif 22)

T G C A C T G A T A G C A T C G G T A C C T A G T G A C A C T G A T G C A G C T A C T G G T C A A T G C A G T C A G C T A C T G
Reverse Opposite:
G T A C C T G A T A C G A T C G C A G T G T A C C T G A A T C G T A G C A C T G A G T C A C T G A T G C A C T G A G C T A C G T
p-value:1e-9
log p-value:-2.246e+01
Information Content per bp:1.696
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif23.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.4 +/- 25.9bp
Average Position of motif in Background54.3 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---VACGCGCGCTGACCTG
ATAAAGGCGCGCGAT----
 A C G T A C G T A C G T T G C A C T G A T A G C A T C G G T A C C T A G T G A C A C T G A T G C A G C T A C T G G T C A A T G C A G T C A G C T A C T G
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:VACGCGCGCTGACCTG
AGGNCANNGTGACCT-
 T G C A C T G A T A G C A T C G G T A C C T A G T G A C A C T G A T G C A G C T A C T G G T C A A T G C A G T C A G C T A C T G
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:VACGCGCGCTGACCTG
--GGCGCGCT------
 T G C A C T G A T A G C A T C G G T A C C T A G T G A C A C T G A T G C A G C T A C T G G T C A A T G C A G T C A G C T A C T G
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---VACGCGCGCTGACCTG
ATAAGGGCGCGCGAT----
 A C G T A C G T A C G T T G C A C T G A T A G C A T C G G T A C C T A G T G A C A C T G A T G C A G C T A C T G G T C A A T G C A G T C A G C T A C T G
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:VACGCGCGCTGACCTG-
---------TGACCTYA
 T G C A C T G A T A G C A T C G G T A C C T A G T G A C A C T G A T G C A G C T A C T G G T C A A T G C A G T C A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:VACGCGCGCTGACCTG
---------TGACCT-
 T G C A C T G A T A G C A T C G G T A C C T A G T G A C A C T G A T G C A G C T A C T G G T C A A T G C A G T C A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---VACGCGCGCTGACCTG
NCANGCGCGCGCGCCA---
 A C G T A C G T A C G T T G C A C T G A T A G C A T C G G T A C C T A G T G A C A C T G A T G C A G C T A C T G G T C A A T G C A G T C A G C T A C T G
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--VACGCGCGCTGACCTG
GTCACGCTCNCTGA----
 A C G T A C G T T G C A C T G A T A G C A T C G G T A C C T A G T G A C A C T G A T G C A G C T A C T G G T C A A T G C A G T C A G C T A C T G
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:VACGCGCGCTGACCTG
--------GTGACCTT
 T G C A C T G A T A G C A T C G G T A C C T A G T G A C A C T G A T G C A G C T A C T G G T C A A T G C A G T C A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:VACGCGCGCTGACCTG
GCCGCGCAGTGCGT--
 T G C A C T G A T A G C A T C G G T A C C T A G T G A C A C T G A T G C A G C T A C T G G T C A A T G C A G T C A G C T A C T G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T