Information for 1-AGAAGTTTMAATCTCA (Motif 6)

C G T A A T C G G C T A C G T A A C T G A C G T G A C T A G C T G T A C G T C A C G T A C G A T G T A C A C G T A T G C C G T A
Reverse Opposite:
C G A T T A C G C G T A A C T G G C T A G C A T A C G T A C T G C T G A C G T A C G T A G T A C A C G T C A G T A T G C C G A T
p-value:1e-12
log p-value:-2.890e+01
Information Content per bp:1.705
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.1 +/- 24.8bp
Average Position of motif in Background46.4 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGAAGTTTMAATCTCA----
--NAGTTTCABTHTGACTNW
 C G T A A T C G G C T A C G T A A C T G A C G T G A C T A G C T G T A C G T C A C G T A C G A T G T A C A C G T A T G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGAAGTTTMAATCTCA
---AGTTTCAGTTTC-
 C G T A A T C G G C T A C G T A A C T G A C G T G A C T A G C T G T A C G T C A C G T A C G A T G T A C A C G T A T G C C G T A
A C G T A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGAAGTTTMAATCTCA---
----CTTTCANTATGACTV
 C G T A A T C G G C T A C G T A A C T G A C G T G A C T A G C T G T A C G T C A C G T A C G A T G T A C A C G T A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGAAGTTTMAATCTCA
---AGTTTCAKTTTC-
 C G T A A T C G G C T A C G T A A C T G A C G T G A C T A G C T G T A C G T C A C G T A C G A T G T A C A C G T A T G C C G T A
A C G T A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGAAGTTTMAATCTCA
-----TTTGAAACCG-
 C G T A A T C G G C T A C G T A A C T G A C G T G A C T A G C T G T A C G T C A C G T A C G A T G T A C A C G T A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGAAGTTTMAATCTCA
---ACTTTCACTTTC-
 C G T A A T C G G C T A C G T A A C T G A C G T G A C T A G C T G T A C G T C A C G T A C G A T G T A C A C G T A T G C C G T A
A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------AGAAGTTTMAATCTCA
TTAAGAGGAAGTTA--------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G G C T A C G T A A C T G A C G T G A C T A G C T G T A C G T C A C G T A C G A T G T A C A C G T A T G C C G T A
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----AGAAGTTTMAATCTCA
ACVAGGAAGT----------
 A C G T A C G T A C G T A C G T C G T A A T C G G C T A C G T A A C T G A C G T G A C T A G C T G T A C G T C A C G T A C G A T G T A C A C G T A T G C C G T A
G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGAAGTTTMAATCTCA
-TCAGTTTCATTTTCC
 C G T A A T C G G C T A C G T A A C T G A C G T G A C T A G C T G T A C G T C A C G T A C G A T G T A C A C G T A T G C C G T A
A C G T C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGAAGTTTMAATCTCA
NGAAGC----------
 C G T A A T C G G C T A C G T A A C T G A C G T G A C T A G C T G T A C G T C A C G T A C G A T G T A C A C G T A T G C C G T A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T