Information for 14-GGAGCCATTCAGG (Motif 26)

T A C G C T A G C G T A A C T G A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G C G T A G T C A A C G T A C T G C T A G A G T C A C G T A G T C A G T C
p-value:1e-7
log p-value:-1.776e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.4 +/- 19.1bp
Average Position of motif in Background63.6 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGAGCCATTCAGG-----
----ACATTCATGACACG
 T A C G C T A G C G T A A C T G A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGAGCCATTCAGG
ACTAGCCAATCA--
 A C G T T A C G C T A G C G T A A C T G A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGAGCCATTCAGG
AAATGGACCAATCAG-
 A C G T A C G T A C G T T A C G C T A G C G T A A C T G A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGAGCCATTCAGG
--AGCCAATCGG-
 T A C G C T A G C G T A A C T G A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGAGCCATTCAGG
--AGCCACTCAAG
 T A C G C T A G C G T A A C T G A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGAGCCATTCAGG
--GGCCATTAAC-
 T A C G C T A G C G T A A C T G A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGAGCCATTCAGG
SCTGTCAVTCAV-
 T A C G C T A G C G T A A C T G A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:-9
Orientation:reverse strand
Alignment:---------GGAGCCATTCAGG---
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G C G T A A C T G A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCCATTCAGG--
NNCATTCATTCATNNN
 A C G T T A C G C T A G C G T A A C T G A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGAGCCATTCAGG----
GACCACATTCATACAAT
 T A C G C T A G C G T A A C T G A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T