Information for 6-GCAGATTGGT (Motif 18)

A C T G A G T C C G T A A C T G G T C A G A C T A G C T A T C G A C T G A G C T
Reverse Opposite:
T C G A A G T C T A G C C T G A C T G A C A G T A G T C C G A T A C T G A G T C
p-value:1e-9
log p-value:-2.133e+01
Information Content per bp:1.843
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif77.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets47.9 +/- 28.9bp
Average Position of motif in Background48.5 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----GCAGATTGGT---
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G G T C A G A C T A G C T A T C G A C T G A G C T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GCAGATTGGT------
-CTGATTGGTCNATTT
 A C T G A G T C C G T A A C T G G T C A G A C T A G C T A T C G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCAGATTGGT-
-CCGATTGGCT
 A C T G A G T C C G T A A C T G G T C A G A C T A G C T A T C G A C T G A G C T A C G T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCAGATTGGT----
--TGATTGGCTANN
 A C T G A G T C C G T A A C T G G T C A G A C T A G C T A T C G A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATTGGT
AACAGATGGT-
 A C G T A C T G A G T C C G T A A C T G G T C A G A C T A G C T A T C G A C T G A G C T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATTGGT
AACAGATGGC-
 A C G T A C T G A G T C C G T A A C T G G T C A G A C T A G C T A T C G A C T G A G C T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATTGGT
CNGTGATTTN-
 A C G T A C T G A G T C C G T A A C T G G T C A G A C T A G C T A T C G A C T G A G C T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAGATTGGT----
GGAGAAAGGTGCGA
 A C T G A G T C C G T A A C T G G T C A G A C T A G C T A T C G A C T G A G C T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCAGATTGGT
-TTGATTGN-
 A C T G A G T C C G T A A C T G G T C A G A C T A G C T A T C G A C T G A G C T
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATTGGT
CGCAGCTGCG-
 A C G T A C T G A G T C C G T A A C T G G T C A G A C T A G C T A T C G A C T G A G C T
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T