Information for 5-GCACGCGTTT (Motif 17)

T C A G A T G C C T G A T A G C A C T G G A T C A T C G G A C T A C G T A G C T
Reverse Opposite:
T C G A T G C A C T G A T A G C C T A G T G A C A T C G G A C T T A C G A G T C
p-value:1e-9
log p-value:-2.279e+01
Information Content per bp:1.656
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif8.35%
Number of Background Sequences with motif1753.2
Percentage of Background Sequences with motif3.70%
Average Position of motif in Targets54.3 +/- 26.7bp
Average Position of motif in Background49.4 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes1/MA1099.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCACGCGTTT
GGCACGCGTC-
 A C G T T C A G A T G C C T G A T A G C A C T G G A T C A T C G G A C T A C G T A G C T
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GCACGCGTTT--
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T T C A G A T G C C T G A T A G C A C T G G A T C A T C G G A C T A C G T A G C T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCACGCGTTT
-CACGCA---
 T C A G A T G C C T G A T A G C A C T G G A T C A T C G G A C T A C G T A G C T
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCACGCGTTT--
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T T C A G A T G C C T G A T A G C A C T G G A T C A T C G G A C T A C G T A G C T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GCACGCGTTT-
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T T C A G A T G C C T G A T A G C A C T G G A T C A T C G G A C T A C G T A G C T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Tcfl5/MA0632.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCACGCGTTT
GGCACGTGCC-
 A C G T T C A G A T G C C T G A T A G C A C T G G A T C A T C G G A C T A C G T A G C T
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCACGCGTTT--
TGGCGCGCGCGCCTGA
 A C G T A C G T A C G T A C G T T C A G A T G C C T G A T A G C A C T G G A T C A T C G G A C T A C G T A G C T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

CLOCK/MA0819.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCACGCGTTT
AACACGTGTT-
 A C G T T C A G A T G C C T G A T A G C A C T G G A T C A T C G G A C T A C G T A G C T
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCACGCGTTT
GCACGTGT--
 T C A G A T G C C T G A T A G C A C T G G A T C A T C G G A C T A C G T A G C T
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCACGCGTTT
NNCACGTGGT-
 A C G T T C A G A T G C C T G A T A G C A C T G G A T C A T C G G A C T A C G T A G C T
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T