Information for 1-GACASAGYCATTA (Motif 3)

A C T G C G T A G T A C C G T A T A C G C G T A A C T G A G T C G A T C C G T A C G A T C G A T C G T A
Reverse Opposite:
C G A T C G T A G C T A C G A T C T A G T C A G T G A C C G A T A T G C G C A T C A T G C G A T T G A C
p-value:1e-8
log p-value:-1.906e+01
Information Content per bp:1.648
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif9.20%
Number of Background Sequences with motif210.7
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets31.4 +/- 25.0bp
Average Position of motif in Background47.2 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:1
Score:0.67
Offset:7
Orientation:reverse strand
Alignment:GACASAGYCATTA--
-------YCATTAMC
 A C T G C G T A G T A C C G T A T A C G C G T A A C T G A G T C G A T C C G T A C G A T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

HOXB3/MA0903.1/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GACASAGYCATTA--
-----ACTAATTAGC
 A C T G C G T A G T A C C G T A T A C G C G T A A C T G A G T C G A T C C G T A C G A T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C

PH0088.1_Isl2/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GACASAGYCATTA----
-CAAAATCAATTAATTT
 A C T G C G T A G T A C C G T A T A C G C G T A A C T G A G T C G A T C C G T A C G A T C G A T C G T A A C G T A C G T A C G T A C G T
A C G T G T A C G C T A G T C A G T C A G T C A A G C T G A T C G T C A G T C A G A C T G A C T C G T A C T G A C A G T C G A T G A C T

BARX1/MA0875.1/Jaspar

Match Rank:4
Score:0.64
Offset:6
Orientation:forward strand
Alignment:GACASAGYCATTA-
------GCAATTAG
 A C T G C G T A G T A C C G T A T A C G C G T A A C T G A G T C G A T C C G T A C G A T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G

GSX2/MA0893.1/Jaspar

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GACASAGYCATTA--
-----ACTAATTAAA
 A C T G C G T A G T A C C G T A T A C G C G T A A C T G A G T C G A T C C G T A C G A T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A

PB0135.1_Hoxa3_2/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GACASAGYCATTA---
--AAAAACCATTAAGG
 A C T G C G T A G T A C C G T A T A C G C G T A A C T G A G T C G A T C C G T A C G A T C G A T C G T A A C G T A C G T A C G T
A C G T A C G T T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

BSX/MA0876.1/Jaspar

Match Rank:7
Score:0.64
Offset:6
Orientation:forward strand
Alignment:GACASAGYCATTA-
------CCAATTAA
 A C T G C G T A G T A C C G T A T A C G C G T A A C T G A G T C G A T C C G T A C G A T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A

NKX6-2/MA0675.1/Jaspar

Match Rank:8
Score:0.64
Offset:6
Orientation:forward strand
Alignment:GACASAGYCATTA-
------CTAATTAA
 A C T G C G T A G T A C C G T A T A C G C G T A A C T G A G T C G A T C C G T A C G A T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A

PDX1/MA0132.2/Jaspar

Match Rank:9
Score:0.64
Offset:6
Orientation:forward strand
Alignment:GACASAGYCATTA-
------GTAATTAG
 A C T G C G T A G T A C C G T A T A C G C G T A A C T G A G T C G A T C C G T A C G A T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G

GSX1/MA0892.1/Jaspar

Match Rank:10
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GACASAGYCATTA--
-----CCTAATTAAA
 A C T G C G T A G T A C C G T A T A C G C G T A A C T G A G T C G A T C C G T A C G A T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C A T G C G A C T G T C A T C G A G C A T G A C T C G T A T C G A G C T A