Information for 6-ATGCAAAGTTCCCCAG (Motif 10)

C T G A A C G T A C T G G T A C C G T A C G T A C T G A A C T G A G C T A C G T A G T C A G T C G T A C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G A C T G T A C G G T C A C T G A A G T C A G C T A C G T A C G T A C T G A G T C G T C A A G C T
p-value:1e-10
log p-value:-2.482e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.8 +/- 18.6bp
Average Position of motif in Background36.8 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAAAGTTCCCCAG
TTATGCAAAT--------
 A C G T A C G T C T G A A C G T A C T G G T A C C G T A C G T A C T G A A C T G A G C T A C G T A G T C A G T C G T A C A G T C C G T A A C T G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATGCAAAGTTCCCCAG
TATGCWAATBAV-----
 A C G T C T G A A C G T A C T G G T A C C G T A C G T A C T G A A C T G A G C T A C G T A G T C A G T C G T A C A G T C C G T A A C T G
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATGCAAAGTTCCCCAG
ATATGCAAAT--------
 A C G T A C G T C T G A A C G T A C T G G T A C C G T A C G T A C T G A A C T G A G C T A C G T A G T C A G T C G T A C A G T C C G T A A C T G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATGCAAAGTTCCCCAG
AGAGTCCAAAGTCCA----
 A C G T A C G T A C G T C T G A A C G T A C T G G T A C C G T A C G T A C T G A A C T G A G C T A C G T A G T C A G T C G T A C A G T C C G T A A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAAAGTTCCCCAG
ATATGCAAATNNN-----
 A C G T A C G T C T G A A C G T A C T G G T A C C G T A C G T A C T G A A C T G A G C T A C G T A G T C A G T C G T A C A G T C C G T A A C T G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATGCAAAGTTCCCCAG
AATATGCAAATT-------
 A C G T A C G T A C G T C T G A A C G T A C T G G T A C C G T A C G T A C T G A A C T G A G C T A C G T A G T C A G T C G T A C A G T C C G T A A C T G
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATGCAAAGTTCCCCAG
TATGCAAAT--------
 A C G T C T G A A C G T A C T G G T A C C G T A C G T A C T G A A C T G A G C T A C G T A G T C A G T C G T A C A G T C C G T A A C T G
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATGCAAAGTTCCCCAG
CANAGNNCAAAGTCCA----
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G G T A C C G T A C G T A C T G A A C T G A G C T A C G T A G T C A G T C G T A C A G T C C G T A A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:ATGCAAAGTTCCCCAG
---------TCCCCA-
 C T G A A C G T A C T G G T A C C G T A C G T A C T G A A C T G A G C T A C G T A G T C A G T C G T A C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATGCAAAGTTCCCCAG
TTATGCAAATTA------
 A C G T A C G T C T G A A C G T A C T G G T A C C G T A C G T A C T G A A C T G A G C T A C G T A G T C A G T C G T A C A G T C C G T A A C T G
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T