Information for 3-AACAAAAACATCCACA (Motif 8)

C G T A C G T A G T A C G T C A C G T A C G T A G T C A C G T A A G T C G T C A A C G T A G T C G T A C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T
p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 27.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AACAAAAACATCCACA
CAAACAACAACACCT---
 A C G T A C G T C G T A C G T A G T A C G T C A C G T A C G T A G T C A C G T A A G T C G T C A A C G T A G T C G T A C C G T A A G T C C G T A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AACAAAAACATCCACA
GTTAAAAAAAAAAATTA---
 A C G T A C G T A C G T A C G T C G T A C G T A G T A C G T C A C G T A C G T A G T C A C G T A A G T C G T C A A C G T A G T C G T A C C G T A A G T C C G T A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AACAAAAACATCCACA
-AAACAAACATTC---
 C G T A C G T A G T A C G T C A C G T A C G T A G T C A C G T A A G T C G T C A A C G T A G T C G T A C C G T A A G T C C G T A
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AACAAAAACATCCACA
GTTCAAAAAAAAAATTC---
 A C G T A C G T A C G T A C G T C G T A C G T A G T A C G T C A C G T A C G T A G T C A C G T A A G T C G T C A A C G T A G T C G T A C C G T A A G T C C G T A
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AACAAAAACATCCACA
AGAAGAACAAAGGACTA----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C G T C A C G T A C G T A G T C A C G T A A G T C G T C A A C G T A G T C G T A C C G T A A G T C C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AACAAAAACATCCACA
AACAAACAACAAGAG-----
 A C G T A C G T A C G T A C G T C G T A C G T A G T A C G T C A C G T A C G T A G T C A C G T A A G T C G T C A A C G T A G T C G T A C C G T A A G T C C G T A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AACAAAAACATCCACA
TACTGGAAAAAAAA--------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C G T C A C G T A C G T A G T C A C G T A A G T C G T C A A C G T A G T C G T A C C G T A A G T C C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AACAAAAACATCCACA
-AAATAAACA------
 C G T A C G T A G T A C G T C A C G T A C G T A G T C A C G T A A G T C G T C A A C G T A G T C G T A C C G T A A G T C C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------AACAAAAACATCCACA
ATATCAAAACAAAACA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C G T C A C G T A C G T A G T C A C G T A A G T C G T C A A C G T A G T C G T A C C G T A A G T C C G T A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AACAAAAACATCCACA
ATAAGAACAAAGGACTA----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C G T C A C G T A C G T A G T C A C G T A A G T C G T C A A C G T A G T C G T A C C G T A A G T C C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T A C G T