Information for 12-ACATTTTTATTGG (Motif 19)

C G T A A G T C C G T A A C G T A G C T A C G T C G A T A C G T C G T A A G C T A C G T C T A G A C T G
Reverse Opposite:
G T A C A G T C C G T A C T G A A C G T C G T A C G T A C G T A C T G A C G T A A C G T A C T G C G A T
p-value:1e-9
log p-value:-2.198e+01
Information Content per bp:1.896
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.0 +/- 14.9bp
Average Position of motif in Background43.3 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA13/MA0650.1/Jaspar

Match Rank:1
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:ACATTTTTATTGG
---TTTTTATTGG
 C G T A A G T C C G T A A C G T A G C T A C G T C G A T A C G T C G T A A G C T A C G T C T A G A C T G
A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:ACATTTTTATTGG
---NTTTTATTGG
 C G T A A G T C C G T A A C G T A G C T A C G T C G A T A C G T C G T A A G C T A C G T C T A G A C T G
A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:ACATTTTTATTGG---
NNANTTTTATTGGNNN
 C G T A A G T C C G T A A C G T A G C T A C G T C G A T A C G T C G T A A G C T A C G T C T A G A C T G A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:ACATTTTTATTGG
---NTTTTATTGG
 C G T A A G T C C G T A A C G T A G C T A C G T C G A T A C G T C G T A A G C T A C G T C T A G A C T G
A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:ACATTTTTATTGG---
NNAATTTTATTGGNTN
 C G T A A G T C C G T A A C G T A G C T A C G T C G A T A C G T C G T A A G C T A C G T C T A G A C T G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.74
Offset:4
Orientation:forward strand
Alignment:ACATTTTTATTGG-
----TTTTATKRGG
 C G T A A G T C C G T A A C G T A G C T A C G T C G A T A C G T C G T A A G C T A C G T C T A G A C T G A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:ACATTTTTATTGG-
----TTTTATTRGN
 C G T A A G T C C G T A A C G T A G C T A C G T C G A T A C G T C G T A A G C T A C G T C T A G A C T G A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ACATTTTTATTGG---
NTNAATTTTATTGNATT
 A C G T C G T A A G T C C G T A A C G T A G C T A C G T C G A T A C G T C G T A A G C T A C G T C T A G A C T G A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:ACATTTTTATTGG
---TTTTTATTGC
 C G T A A G T C C G T A A C G T A G C T A C G T C G A T A C G T C G T A A G C T A C G T C T A G A C T G
A C G T A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:ACATTTTTATTGG
----TTTTATTGC
 C G T A A G T C C G T A A C G T A G C T A C G T C G A T A C G T C G T A A G C T A C G T C T A G A C T G
A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C