Information for 8-CTGYRSTTTGTMT (Motif 12)

A G T C A C G T A C T G A G C T C T G A A T C G A C G T A C G T A C G T A C T G A C G T G T C A A C G T
Reverse Opposite:
C G T A C A G T C G T A A G T C C G T A C G T A C G T A T A G C G A C T C T G A A G T C C G T A A C T G
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.8 +/- 26.2bp
Average Position of motif in Background52.8 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTGYRSTTTGTMT
CTGTGGTTTN---
 A G T C A C G T A C T G A G C T C T G A A T C G A C G T A C G T A C G T A C T G A C G T G T C A A C G T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGYRSTTTGTMT----
-ANTCCTTTGTCTNNNN
 A G T C A C G T A C T G A G C T C T G A A T C G A C G T A C G T A C G T A C T G A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTGYRSTTTGTMT
GCTGTGGTTT----
 A C G T A G T C A C G T A C T G A G C T C T G A A T C G A C G T A C G T A C G T A C T G A C G T G T C A A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGYRSTTTGTMT
NNTGTGGTTT----
 A C G T A G T C A C G T A C T G A G C T C T G A A T C G A C G T A C G T A C G T A C T G A C G T G T C A A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTGYRSTTTGTMT
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C A C G T A C T G A G C T C T G A A T C G A C G T A C G T A C G T A C T G A C G T G T C A A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTGYRSTTTGTMT
GTCTGTGGTTT----
 A C G T A C G T A G T C A C G T A C T G A G C T C T G A A T C G A C G T A C G T A C G T A C T G A C G T G T C A A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CTGYRSTTTGTMT-
----CCTTTGTTTT
 A G T C A C G T A C T G A G C T C T G A A T C G A C G T A C G T A C G T A C T G A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CTGYRSTTTGTMT
-----CTTTGT--
 A G T C A C G T A C T G A G C T C T G A A T C G A C G T A C G T A C G T A C T G A C G T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGYRSTTTGTMT
CTGACCTTTG---
 A G T C A C G T A C T G A G C T C T G A A T C G A C G T A C G T A C G T A C T G A C G T G T C A A C G T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGYRSTTTGTMT----
-TGGACTTTGNNCTNTG
 A G T C A C G T A C T G A G C T C T G A A T C G A C G T A C G T A C G T A C T G A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G