Information for 4-GGCCTGGTGASGT (Motif 9)

A C T G C T A G A T G C A G T C C A G T A T C G A C T G A C G T A C T G C G T A A T G C C A T G A C G T
Reverse Opposite:
T C G A G A T C T A C G A C G T T A G C C G T A A G T C A T G C G C T A C T A G A T C G A G T C A G T C
p-value:1e-9
log p-value:-2.184e+01
Information Content per bp:1.717
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.46%
Number of Background Sequences with motif92.1
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets53.3 +/- 25.8bp
Average Position of motif in Background51.8 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGCCTGGTGASGT
AGGCCTAG------
 A C G T A C T G C T A G A T G C A G T C C A G T A T C G A C T G A C G T A C T G C G T A A T G C C A T G A C G T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCCTGGTGASGT
-RTCATGTGAC--
 A C T G C T A G A T G C A G T C C A G T A T C G A C T G A C G T A C T G C G T A A T G C C A T G A C G T
A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGCCTGGTGASGT
--NCACGTGACN-
 A C T G C T A G A T G C A G T C C A G T A T C G A C T G A C G T A C T G C G T A A T G C C A T G A C G T
A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGCCTGGTGASGT
AGGCCTNG------
 A C G T A C T G C T A G A T G C A G T C C A G T A T C G A C T G A C G T A C T G C G T A A T G C C A T G A C G T
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCCTGGTGASGT
-KCCACGTGAC--
 A C T G C T A G A T G C A G T C C A G T A T C G A C T G A C G T A C T G C G T A A T G C C A T G A C G T
A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GGCCTGGTGASGT
-------TGACGT
 A C T G C T A G A T G C A G T C C A G T A T C G A C T G A C G T A C T G C G T A A T G C C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

Atf1/MA0604.1/Jaspar

Match Rank:7
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GGCCTGGTGASGT-
------ATGACGTA
 A C T G C T A G A T G C A G T C C A G T A T C G A C T G A C G T A C T G C G T A A T G C C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

USF1/MA0093.2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCCTGGTGASGT
-GCCACGTGACC-
 A C T G C T A G A T G C A G T C C A G T A T C G A C T G A C G T A C T G C G T A A T G C C A T G A C G T
A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

USF2/MA0526.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCCTGGTGASGT
-GTCATGTGACC-
 A C T G C T A G A T G C A G T C C A G T A T C G A C T G A C G T A C T G C G T A A T G C C A T G A C G T
A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCCTGGTGASGT
CCGGTCACGTGA---
 A C G T A C G T A C T G C T A G A T G C A G T C C A G T A T C G A C T G A C G T A C T G C G T A A T G C C A T G A C G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T A C G T