Information for 5-GAAARGKGRRAAGAAA (Motif 8)

A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A C T G A G T C A G T C A A C T G C G T A C T G A C G T A
Reverse Opposite:
A C G T A G C T A C G T A G T C A C G T A C G T A G C T A G C T A G T C G T A C A G T C A G T C A C G T A C G T A C G T A G T C
p-value:1e-11
log p-value:-2.541e+01
Information Content per bp:1.876
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 19.6bp
Average Position of motif in Background71.4 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF2/MA0051.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAARGKGRRAAGAAA--
GGAAAGCGAAACCAAAAC
 A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A C T G A G T C A G T C A A C T G C G T A C T G A C G T A A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GAAARGKGRRAAGAAA
GGAGAAAGGTGCGA-----
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A C T G A G T C A G T C A A C T G C G T A C T G A C G T A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAAARGKGRRAAGAAA--
GGAAGGAAGGAAGGAAGG
 A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A C T G A G T C A G T C A A C T G C G T A C T G A C G T A A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAAARGKGRRAAGAAA
--AAGGTGTKAA----
 A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A C T G A G T C A G T C A A C T G C G T A C T G A C G T A
A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAAARGKGRRAAGAAA
--AAGGTGTGAA----
 A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A C T G A G T C A G T C A A C T G C G T A C T G A C G T A
A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAAARGKGRRAAGAAA
--TAGGTGTGAAG---
 A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A C T G A G T C A G T C A A C T G C G T A C T G A C G T A
A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GAAARGKGRRAAGAAA--
---AGCCGAAAAAAAAAT
 A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A C T G A G T C A G T C A A C T G C G T A C T G A C G T A A C G T A C G T
A C G T A C G T A C G T C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAAARGKGRRAAGAAA
--AAGGTGTGAAAAT-
 A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A C T G A G T C A G T C A A C T G C G T A C T G A C G T A
A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GAAARGKGRRAAGAAA----
-----GGAAANTGAAACTNA
 A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A C T G A G T C A G T C A A C T G C G T A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GAAARGKGRRAAGAAA------
-AAANNGAAAGTGAAAGTAAAN
 A C T G C G T A C G T A C G T A C T A G A C T G A C G T A C T G C T G A C T G A G T C A G T C A A C T G C G T A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A