Information for 3-GGGGAGARGGGCATTG (Motif 6)

A C T G A C T G A T C G A C T G C G T A A T C G G T C A C T G A A C T G A C T G A C T G A G T C C G T A G A C T A C G T A C T G
Reverse Opposite:
G T A C C G T A C T G A C G A T A C T G G T A C A G T C A G T C A G C T A C G T A T G C A C G T G T A C A T G C A G T C G T A C
p-value:1e-11
log p-value:-2.541e+01
Information Content per bp:1.800
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.3 +/- 25.3bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGGGAGARGGGCATTG
NNAGGGACAAGGGCNC--
 A C G T A C G T A C T G A C T G A T C G A C T G C G T A A T C G G T C A C T G A A C T G A C T G A C T G A G T C C G T A G A C T A C G T A C T G
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAGARGGGCATTG
GTGGGGGAGGGG-----
 A C G T A C T G A C T G A T C G A C T G C G T A A T C G G T C A C T G A A C T G A C T G A C T G A G T C C G T A G A C T A C G T A C T G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GGGGAGARGGGCATTG----
------NAGGTCANTGACCT
 A C T G A C T G A T C G A C T G C G T A A T C G G T C A C T G A A C T G A C T G A C T G A G T C C G T A G A C T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAGARGGGCATTG
TGGGGCAAAGGTCA---
 A C G T A C T G A C T G A T C G A C T G C G T A A T C G G T C A C T G A A C T G A C T G A C T G A G T C C G T A G A C T A C G T A C T G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T

RARA/MA0729.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGGGAGARGGGCATTG
GAGGTCAAAAGGTCAATG
 A C G T A C G T A C T G A C T G A T C G A C T G C G T A A T C G G T C A C T G A A C T G A C T G A C T G A G T C C G T A G A C T A C G T A C T G
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGGAGARGGGCATTG
-AGGTCAAGGTCA---
 A C T G A C T G A T C G A C T G C G T A A T C G G T C A C T G A A C T G A C T G A C T G A G T C C G T A G A C T A C G T A C T G
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGGAGARGGGCATTG
TAGGGCAAAGGTCA---
 A C G T A C T G A C T G A T C G A C T G C G T A A T C G G T C A C T G A A C T G A C T G A C T G A G T C C G T A G A C T A C G T A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGGGAGARGGGCATTG
GGGGGGGGGGGGGGA---
 A C G T A C G T A C T G A C T G A T C G A C T G C G T A A T C G G T C A C T G A A C T G A C T G A C T G A G T C C G T A G A C T A C G T A C T G
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGGAGARGGGCATTG
GTAGGGCAAAGGTCA---
 A C G T A C G T A C T G A C T G A T C G A C T G C G T A A T C G G T C A C T G A A C T G A C T G A C T G A G T C C G T A G A C T A C G T A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGGGAGARGGGCATTG
-GGGGGCGGGGC----
 A C T G A C T G A T C G A C T G C G T A A T C G G T C A C T G A A C T G A C T G A C T G A G T C C G T A G A C T A C G T A C T G
A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T