Information for 15-TGRCCGGGAA (Motif 43)

A G C T A C T G C T A G A G T C A G T C A T C G A T C G A C T G C G T A T C G A
Reverse Opposite:
A C G T A C G T A G T C T A G C A T G C A C T G A C T G G A T C A G T C C T G A
p-value:1e-5
log p-value:-1.369e+01
Information Content per bp:1.810
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif101.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets52.1 +/- 33.9bp
Average Position of motif in Background46.4 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGRCCGGGAA----
NNNACCGAGAGTNNN
 A C G T A G C T A C T G C T A G A G T C A G T C A T C G A T C G A C T G C G T A T C G A A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGRCCGGGAA---
GCTGACCTTGAACTN
 A C G T A C G T A G C T A C T G C T A G A G T C A G T C A T C G A T C G A C T G C G T A T C G A A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Esrra/MA0592.2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGRCCGGGAA
ATGACCTTGAA
 A C G T A G C T A C T G C T A G A G T C A G T C A T C G A T C G A C T G C G T A T C G A
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGRCCGGGAA
TGACCTTGAN
 A G C T A C T G C T A G A G T C A G T C A T C G A T C G A C T G C G T A T C G A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGRCCGGGAA----
GNNACCGAGAATNNN
 A C G T A G C T A C T G C T A G A G T C A G T C A T C G A T C G A C T G C G T A T C G A A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGRCCGGGAA-
BTKGGCGGGAAA
 A C G T A G C T A C T G C T A G A G T C A G T C A T C G A T C G A C T G C G T A T C G A A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGRCCGGGAA--
-GGGCGGGAAGG
 A G C T A C T G C T A G A G T C A G T C A T C G A T C G A C T G C G T A T C G A A C G T A C G T
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGRCCGGGAA
TGACCTTGAV
 A G C T A C T G C T A G A G T C A G T C A T C G A T C G A C T G C G T A T C G A
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGRCCGGGAA--
-GGGCGGGAAGG
 A G C T A C T G C T A G A G T C A G T C A T C G A T C G A C T G C G T A T C G A A C G T A C G T
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGRCCGGGAA
NATGACCTTGA-
 A C G T A C G T A G C T A C T G C T A G A G T C A G T C A T C G A T C G A C T G C G T A T C G A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T