Information for 17-GTGAGCACACACT (Motif 41)

C T A G A C G T C T A G C G T A A C T G G T A C C G T A A G T C C G T A A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T C T A G A C G T A C T G A C G T A C T G A G T C A C G T A G T C C G T A A G T C
p-value:1e-6
log p-value:-1.417e+01
Information Content per bp:1.933
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 24.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTGAGCACACACT---
AGCGGCACACACGCAA
 C T A G A C G T C T A G C G T A A C T G G T A C C G T A A G T C C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GTGAGCACACACT-
CAGATGTGCACATACGT
 A C G T A C G T A C G T C T A G A C G T C T A G C G T A A C T G G T A C C G T A A G T C C G T A A G T C C G T A A G T C A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GTGAGCACACACT-
TACATGTGCACATAAAA
 A C G T A C G T A C G T C T A G A C G T C T A G C G T A A C T G G T A C C G T A A G T C C G T A A G T C C G T A A G T C A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTGAGCACACACT
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T C T A G A C G T C T A G C G T A A C T G G T A C C G T A A G T C C G T A A G T C C G T A A G T C A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGAGCACACACT---
CGAAGCACACAAAATA
 C T A G A C G T C T A G C G T A A C T G G T A C C G T A A G T C C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGAGCACACACT
GTCAGCANNTN--
 C T A G A C G T C T A G C G T A A C T G G T A C C G T A A G T C C G T A A G T C C G T A A G T C A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGAGCACACACT
-WAAGTAAAYA--
 C T A G A C G T C T A G C G T A A C T G G T A C C G T A A G T C C G T A A G T C C G T A A G T C A C G T
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GTGAGCACACACT
GGGCCGTGTGCAAAAA--
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T C T A G C G T A A C T G G T A C C G T A A G T C C G T A A G T C C G T A A G T C A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTGAGCACACACT
--AAGCACTTAA-
 C T A G A C G T C T A G C G T A A C T G G T A C C G T A A G T C C G T A A G T C C G T A A G T C A C G T
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTGAGCACACACT-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T C T A G A C G T C T A G C G T A A C T G G T A C C G T A A G T C C G T A A G T C C G T A A G T C A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G