Information for 2-GATACATGCWGCK (Motif 4)

A C T G G T C A A C G T G T C A G T A C C G T A A C G T A C T G A G T C C G T A A C T G A G T C A C T G
Reverse Opposite:
G T A C A C T G A G T C C G A T A C T G G T A C C G T A A C G T A C T G A C G T C G T A A C G T A G T C
p-value:1e-11
log p-value:-2.541e+01
Information Content per bp:1.853
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.4 +/- 26.0bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GATACATGCWGCK
NTTGATACATT-----
 A C G T A C G T A C G T A C T G G T C A A C G T G T C A G T A C C G T A A C G T A C T G A G T C C G T A A C T G A G T C A C T G
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GATACATGCWGCK---
-TCNCCTGCTGNGNNN
 A C T G G T C A A C G T G T C A G T A C C G T A A C G T A C T G A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GATACATGCWGCK-
----CCTGCTGAGH
 A C T G G T C A A C G T G T C A G T A C C G T A A C G T A C T G A G T C C G T A A C T G A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GATACATGCWGCK---
-TNTCCTGCTGTGNNG
 A C T G G T C A A C G T G T C A G T A C C G T A A C G T A C T G A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GATACATGCWGCK---
-NNTCCTGCTGTGNNN
 A C T G G T C A A C G T G T C A G T A C C G T A A C G T A C T G A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PH0082.1_Irx2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GATACATGCWGCK--
TAAATACATGTAAAATT
 A C G T A C G T A C T G G T C A A C G T G T C A G T A C C G T A A C G T A C T G A G T C C G T A A C T G A G T C A C T G A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PB0163.1_Six6_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GATACATGCWGCK
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A C G T A C T G G T C A A C G T G T C A G T A C C G T A A C G T A C T G A G T C C G T A A C T G A G T C A C T G
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GATACATGCWGCK
TGATTGATGA----
 A C G T A C T G G T C A A C G T G T C A G T A C C G T A A C G T A C T G A G T C C G T A A C T G A G T C A C T G
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GATACATGCWGCK-
GGCCYCCTGCTGDGH
 A C G T A C T G G T C A A C G T G T C A G T A C C G T A A C G T A C T G A G T C C G T A A C T G A G T C A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PH0084.1_Irx3_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GATACATGCWGCK--
AATATACATGTAATATA
 A C G T A C G T A C T G G T C A A C G T G T C A G T A C C G T A A C G T A C T G A G T C C G T A A C T G A G T C A C T G A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T