Information for 16-TCAGCCNCGGCTG (Motif 38)

A C G T A T G C C G T A A C T G A T G C G T A C C T G A A G T C C A T G A T C G A G T C C G A T A C T G
Reverse Opposite:
T G A C C G T A A C T G A T G C G T A C C T A G G A C T A C T G A T C G T A G C C G A T A T C G T G C A
p-value:1e-6
log p-value:-1.451e+01
Information Content per bp:1.708
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif134.8
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets51.7 +/- 22.5bp
Average Position of motif in Background53.9 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCCNCGGCTG-
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A T G C C G T A A C T G A T G C G T A C C T G A A G T C C A T G A T C G A G T C C G A T A C T G A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:TCAGCCNCGGCTG
--------NGCTN
 A C G T A T G C C G T A A C T G A T G C G T A C C T G A A G T C C A T G A T C G A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCAGCCNCGGCTG-
GTCATGCHTGRCTGS
 A C G T A C G T A T G C C G T A A C T G A T G C G T A C C T G A A G T C C A T G A T C G A G T C C G A T A C T G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCAGCCNCGGCTG-----
---GGNGCGNCTGTTNNN
 A C G T A T G C C G T A A C T G A T G C G T A C C T G A A G T C C A T G A T C G A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCAGCCNCGGCTG--
NNGGCCACGCCTTTN
 A C G T A T G C C G T A A C T G A T G C G T A C C T G A A G T C C A T G A T C G A G T C C G A T A C T G A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PAX5/MA0014.2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCAGCCNCGGCTG-----
GTCACGCTTGGCTGCNCNN
 A C G T A C G T A T G C C G T A A C T G A T G C G T A C C T G A A G T C C A T G A T C G A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.56
Offset:9
Orientation:forward strand
Alignment:TCAGCCNCGGCTG--
---------GCTGTG
 A C G T A T G C C G T A A C T G A T G C G T A C C T G A A G T C C A T G A T C G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TCAGCCNCGGCTG--
-----CGCAGCTGCG
 A C G T A T G C C G T A A C T G A T G C G T A C C T G A A G T C C A T G A T C G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCAGCCNCGGCTG-
----CAGCAGCTGN
 A C G T A T G C C G T A A C T G A T G C G T A C C T G A A G T C C A T G A T C G A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCAGCCNCGGCTG--
---NNAGCAGCTGCT
 A C G T A T G C C G T A A C T G A T G C G T A C C T G A A G T C C A T G A T C G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T