Information for 9-GKTGCRGBCT (Motif 33)

A C T G C A G T A C G T C A T G A G T C T C G A C A T G A C G T A T G C C G A T
Reverse Opposite:
G C T A A T C G T G C A G T A C A G C T T C A G G T A C G T C A G T C A G T A C
p-value:1e-7
log p-value:-1.758e+01
Information Content per bp:1.636
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif8.66%
Number of Background Sequences with motif1977.2
Percentage of Background Sequences with motif4.15%
Average Position of motif in Targets46.3 +/- 25.6bp
Average Position of motif in Background49.8 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GKTGCRGBCT
TTTGCGGTTT
 A C T G C A G T A C G T C A T G A G T C T C G A C A T G A C G T A T G C C G A T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GKTGCRGBCT
-TTGCGGTTT
 A C T G C A G T A C G T C A T G A G T C T C G A C A T G A C G T A T G C C G A T
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GKTGCRGBCT--
----TWGTCTGV
 A C T G C A G T A C G T C A T G A G T C T C G A C A T G A C G T A T G C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GKTGCRGBCT--
----CTGTCTGG
 A C T G C A G T A C G T C A T G A G T C T C G A C A T G A C G T A T G C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

IRF8/MA0652.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GKTGCRGBCT---
AGTTTCGGTTTCGN
 A C G T A C T G C A G T A C G T C A T G A G T C T C G A C A T G A C G T A T G C C G A T A C G T A C G T A C G T
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GKTGCRGBCT-
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A C T G C A G T A C G T C A T G A G T C T C G A C A T G A C G T A T G C C G A T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

IRF9/MA0653.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GKTGCRGBCT----
AGTTTCGGTTTCGTT
 A C G T A C T G C A G T A C G T C A T G A G T C T C G A C A T G A C G T A T G C C G A T A C G T A C G T A C G T A C G T
C T G A A T C G C G A T C G A T A C G T G A T C C T A G A T C G C A G T C G A T A C G T G A T C C T A G C G A T C G A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GKTGCRGBCT
TGGTTTCAGT--
 A C G T A C G T A C T G C A G T A C G T C A T G A G T C T C G A C A T G A C G T A T G C C G A T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GKTGCRGBCT--
--TGCTGACTCA
 A C T G C A G T A C G T C A T G A G T C T C G A C A T G A C G T A T G C C G A T A C G T A C G T
A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GKTGCRGBCT
NTGGGTGTGGCC-
 A C G T A C G T A C G T A C T G C A G T A C G T C A T G A G T C T C G A C A T G A C G T A T G C C G A T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T