Information for 6-ATTAGATTAGAAT (Motif 18)

C G T A A G C T A C G T C G T A A C T G C G T A A C G T A C G T C G T A T A C G C G T A C G T A A G C T
Reverse Opposite:
C T G A A C G T C G A T A T G C C G A T C G T A C G T A C G A T A G T C A C G T C G T A C T G A A C G T
p-value:1e-9
log p-value:-2.196e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.3 +/- 26.2bp
Average Position of motif in Background70.7 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PHOX2A/MA0713.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ATTAGATTAGAAT
TAATTAAATTA----
 A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A A C G T A C G T C G T A T A C G C G T A C G T A A G C T
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ATTAGATTAGAAT----
-TAAGATTATAATACGG
 C G T A A G C T A C G T C G T A A C T G C G T A A C G T A C G T C G T A T A C G C G T A C G T A A G C T A C G T A C G T A C G T A C G T
A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PROP1/MA0715.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATTAGATTAGAAT
TAATTAAATTA----
 A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A A C G T A C G T C G T A T A C G C G T A C G T A A G C T
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T A C G T A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATTAGATTAGAAT
TAATTAAATTA----
 A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A A C G T A C G T C G T A T A C G C G T A C G T A A G C T
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A A C G T A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATTAGATTAGAAT
TGATTAAATTA----
 A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A A C G T A C G T C G T A T A C G C G T A C G T A A G C T
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ATTAGATTAGAAT
NTGATTAAATTAN---
 A C G T A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A A C G T A C G T C G T A T A C G C G T A C G T A A G C T
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G A C G T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATTAGATTAGAAT
NWTGATTRGRTTAWN--
 A C G T A C G T A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A A C G T A C G T C G T A T A C G C G T A C G T A A G C T
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C A C G T A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATTAGATTAGAAT
TAATYNRATTAR---
 A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A A C G T A C G T C G T A T A C G C G T A C G T A A G C T
G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G A C G T A C G T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATTAGATTAGAAT--
TATAGAGATAAGAATTG
 A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A A C G T A C G T C G T A T A C G C G T A C G T A A G C T A C G T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

PB0079.1_Sry_1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATTAGATTAGAAT----
-TATAATTATAATATTC
 C G T A A G C T A C G T C G T A A C T G C G T A A C G T A C G T C G T A T A C G C G T A C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C