Information for 3-ATTAACATCT (Motif 17)

C G T A A C G T A G C T C G T A G T C A A G T C C G T A A C G T G T A C A G C T
Reverse Opposite:
C T G A C A T G T G C A A C G T C T A G A C G T C G A T C T G A C G T A A C G T
p-value:1e-9
log p-value:-2.205e+01
Information Content per bp:1.785
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif85.2
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets57.9 +/- 26.1bp
Average Position of motif in Background52.4 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:ATTAACATCT
ATTAACACCT
 C G T A A C G T A G C T C G T A G T C A A G T C C G T A A C G T G T A C A G C T
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---ATTAACATCT
BTVATTWGCATA-
 A C G T A C G T A C G T C G T A A C G T A G C T C G T A G T C A A G T C C G T A A C G T G T A C A G C T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---ATTAACATCT
CTCATTTGCATW-
 A C G T A C G T A C G T C G T A A C G T A G C T C G T A G T C A A G T C C G T A A C G T G T A C A G C T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--ATTAACATCT
TAATTTGCATAA
 A C G T A C G T C G T A A C G T A G C T C G T A G T C A A G T C C G T A A C G T G T A C A G C T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--ATTAACATCT
TAATTTGCATAA
 A C G T A C G T C G T A A C G T A G C T C G T A G T C A A G T C C G T A A C G T G T A C A G C T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU3F4/MA0789.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATTAACATCT
ATTTGCATA-
 C G T A A C G T A G C T C G T A G T C A A G T C C G T A A C G T G T A C A G C T
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATTAACATCT
ATTTGCATA-
 C G T A A C G T A G C T C G T A G T C A A G T C C G T A A C G T G T A C A G C T
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ATTAACATCT
YCATTAMC----
 A C G T A C G T C G T A A C G T A G C T C G T A G T C A A G T C C G T A A C G T G T A C A G C T
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ATTAACATCT-
AAATTAGCATAAT
 A C G T A C G T C G T A A C G T A G C T C G T A G T C A A G T C C G T A A C G T G T A C A G C T A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATTAACATCT-
AATTTGCATANT
 A C G T C G T A A C G T A G C T C G T A G T C A A G T C C G T A A C G T G T A C A G C T A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T