Information for 4-GTSAAWGTAACKATTT (Motif 5)

A C T G A C G T A T G C C G T A C T G A C G T A A C T G C G A T C G T A C G T A T G A C A C G T G C T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G A T G T C A A C T G A C G T A C G T C G T A A G T C C G A T A G C T A C G T A T C G T C G A A G T C
p-value:1e-11
log p-value:-2.621e+01
Information Content per bp:1.831
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.5 +/- 19.5bp
Average Position of motif in Background38.3 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTSAAWGTAACKATTT
---TATGTAAATAT--
 A C T G A C G T A T G C C G T A C T G A C G T A A C T G C G A T C G T A C G T A T G A C A C G T G C T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTSAAWGTAACKATTT
---TATGTAAATAT--
 A C T G A C G T A T G C C G T A C T G A C G T A A C T G C G A T C G T A C G T A T G A C A C G T G C T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTSAAWGTAACKATTT
---AAAGTAAACA---
 A C T G A C G T A T G C C G T A C T G A C G T A A C T G C G A T C G T A C G T A T G A C A C G T G C T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTSAAWGTAACKATTT
---AAAGTAAACA---
 A C T G A C G T A T G C C G T A C T G A C G T A A C T G C G A T C G T A C G T A T G A C A C G T G C T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GTSAAWGTAACKATTT
AGAAAGTGAAAGTGA------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A T G C C G T A C T G A C G T A A C T G C G A T C G T A C G T A T G A C A C G T G C T A A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GTSAAWGTAACKATTT
GAAAGTGAAAGT--------
 A C G T A C G T A C G T A C G T A C T G A C G T A T G C C G T A C T G A C G T A A C T G C G A T C G T A C G T A T G A C A C G T G C T A A C G T A C G T A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GTSAAWGTAACKATTT-
--CAAAGTAAACANNNN
 A C T G A C G T A T G C C G T A C T G A C G T A A C T G C G A T C G T A C G T A T G A C A C G T G C T A A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GTSAAWGTAACKATTT---
--CNNAGTAATTAATTNNC
 A C T G A C G T A T G C C G T A C T G A C G T A A C T G C G A T C G T A C G T A T G A C A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C T C A G T C G A C T G A C A T G G A C T G T C A C G T A C G A T C G A T C T G A G C T A C G A T G C A T C G A T A C G T G A T C

Foxa2/MA0047.2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTSAAWGTAACKATTT
-NCTAAGTAAACA---
 A C T G A C G T A T G C C G T A C T G A C G T A A C T G C G A T C G T A C G T A T G A C A C G T G C T A A C G T A C G T A C G T
A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GTSAAWGTAACKATTT
---TAAGTAAACAAA-
 A C T G A C G T A T G C C G T A C T G A C G T A A C T G C G A T C G T A C G T A T G A C A C G T G C T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T