Information for 2-GTCTGTGTCMTTATTR (Motif 3)

A C T G A C G T A G T C C G A T A T C G C G A T C A T G A C G T G T A C G T A C A C G T C G A T G T C A A C G T A G C T C T G A
Reverse Opposite:
A G C T C T G A T G C A A C G T C G T A G T C A A C T G A C T G C G T A G T A C C G T A A T G C C G T A C T A G C G T A T A G C
p-value:1e-11
log p-value:-2.662e+01
Information Content per bp:1.708
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.2 +/- 16.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCTGTGTCMTTATTR
CTTTGTTTACTTTTN-
 A C T G A C G T A G T C C G A T A T C G C G A T C A T G A C G T G T A C G T A C A C G T C G A T G T C A A C G T A G C T C T G A
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T

FOS/MA0476.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTCTGTGTCMTTATTR
-TGTGACTCATT----
 A C T G A C G T A G T C C G A T A T C G C G A T C A T G A C G T G T A C G T A C A C G T C G A T G T C A A C G T A G C T C T G A
A C G T C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTCTGTGTCMTTATTR
---TGAGTCATTTC--
 A C T G A C G T A G T C C G A T A T C G C G A T C A T G A C G T G T A C G T A C A C G T C G A T G T C A A C G T A G C T C T G A
A C G T A C G T A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTCTGTGTCMTTATTR
-TNTGTTTACTT----
 A C T G A C G T A G T C C G A T A T C G C G A T C A T G A C G T G T A C G T A C A C G T C G A T G T C A A C G T A G C T C T G A
A C G T G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTCTGTGTCMTTATTR
---TGAGTCA------
 A C T G A C G T A G T C C G A T A T C G C G A T C A T G A C G T G T A C G T A C A C G T C G A T G T C A A C G T A G C T C T G A
A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTCTGTGTCMTTATTR
NNNTTTGTTTACTTTTN-
 A C G T A C G T A C T G A C G T A G T C C G A T A T C G C G A T C A T G A C G T G T A C G T A C A C G T C G A T G T C A A C G T A G C T C T G A
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTCTGTGTCMTTATTR
---TGTTTACTTT---
 A C T G A C G T A G T C C G A T A T C G C G A T C A T G A C G T G T A C G T A C A C G T C G A T G T C A A C G T A G C T C T G A
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTCTGTGTCMTTATTR
---TGTTTACTTT---
 A C T G A C G T A G T C C G A T A T C G C G A T C A T G A C G T G T A C G T A C A C G T C G A T G T C A A C G T A G C T C T G A
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GTCTGTGTCMTTATTR
NNNNTTTGTTTACNNT---
 A C G T A C G T A C G T A C T G A C G T A G T C C G A T A T C G C G A T C A T G A C G T G T A C G T A C A C G T C G A T G T C A A C G T A G C T C T G A
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T A C G T A C G T A C G T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GTCTGTGTCMTTATTR
-DATGASTCAT-----
 A C T G A C G T A G T C C G A T A T C G C G A T C A T G A C G T G T A C G T A C A C G T C G A T G T C A A C G T A G C T C T G A
A C G T C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T