p-value: | 1e-13 |
log p-value: | -3.153e+01 |
Information Content per bp: | 1.875 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.78% |
Number of Background Sequences with motif | 1.6 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 53.7 +/- 27.7bp |
Average Position of motif in Background | 42.1 +/- 33.1bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0024.1_Gcm1_1/Jaspar
Match Rank: | 1 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----ATKCTGSTYWAAA NNNNATGCGGGTNNNN- |
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SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer
Match Rank: | 2 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ATKCTGSTYWAAA ACATCCTGNT----- |
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HOXC13/MA0907.1/Jaspar
Match Rank: | 3 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ATKCTGSTYWAAA --GCTCGTAAAAA |
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GCM2/MA0767.1/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATKCTGSTYWAAA TATGCGGGTA---- |
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PH0068.1_Hoxc13/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATKCTGSTYWAAA-- AAAGCTCGTAAAATTT |
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Rhox11/MA0629.1/Jaspar
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATKCTGSTYWAAA---- AAGACGCTGTAAAGCGA |
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PH0157.1_Rhox11_1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATKCTGSTYWAAA---- AAGACGCTGTAAAGCGA |
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GCM1/MA0646.1/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATKCTGSTYWAAA CATGCGGGTAC--- |
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PH0040.1_Hmbox1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ATKCTGSTYWAAA-- GAAAACTAGTTAACATC |
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PH0158.1_Rhox11_2/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATKCTGSTYWAAA---- AGGACGCTGTAAAGGGA |
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